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Cggbp1 Gene Detail
Summary
  • Symbol
    Cggbp1
  • Name
    CGG triplet repeat binding protein 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146370
    NCBI Gene: 106143
  • Gene Overview
    MyGene.info: CGGBP1
Location & Maps
more
  • Sequence Map
    Chr16:64851996-64859507 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7512 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 37.10 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CGGBP1, CGG triplet repeat binding protein 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    CGGBP1, CGG triplet repeat binding protein 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CGGBP, p20-CGGBP
  • Links
    NCBI Gene ID: 8545
    neXtProt AC: NX_Q9UFW8

  • Chr Location
    3p11.1; chr3:88051950-88149866 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    27
  • Gene trapped
    25
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026276 VEGA Gene Model | MGI Sequence Detail 7512 C57BL/6J ±  kb
transcript OTTMUST00000064976 VEGA | MGI Sequence Detail 4425 Not Applicable  
polypeptide OTTMUSP00000032325 VEGA | MGI Sequence Detail 167 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    33 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005392 CGG triplet repeat-binding protein 1
  • InterPro Domains
    IPR033375 CGG triplet repeat-binding protein 1
Molecular
Reagents
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  • All nucleic 16
    cDNA 13
    Primer pair 1
    Other 2

    Microarray probesets 7
Other
Accession IDs
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MGI:2146527, MGI:2146608
References
more
  • Summaries
    All 32
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory