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Slc45a4 Gene Detail
Summary
  • Symbol
    Slc45a4
  • Name
    solute carrier family 45, member 4
  • Synonyms
    9330175B01Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146236
    NCBI Gene: 106068
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:73577424-73645762 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 34.02 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    503 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2146236
protein coding gene Chr15:73577418-73645762 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021922
protein coding gene Chr15:73321435-73392115 (-)
A/J MGP_AJ_G0021881
protein coding gene Chr15:70700310-70774207 (-)
AKR/J MGP_AKRJ_G0021863
protein coding gene Chr15:72509672-72577922 (-)
BALB/cJ MGP_BALBcJ_G0021888
protein coding gene Chr15:70709771-70778667 (-)
C3H/HeJ MGP_C3HHeJ_G0021661
protein coding gene Chr15:72656924-72728517 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022328
protein coding gene Chr15:76111548-76185429 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019864
protein coding gene Chr15:67128575-67196749 (-)
CAST/EiJ MGP_CASTEiJ_G0021180
protein coding gene Chr15:73461337-73531242 (-)
CBA/J MGP_CBAJ_G0021627
protein coding gene Chr15:78596942-78676216 (-)
DBA/2J MGP_DBA2J_G0021752
protein coding gene Chr15:70308468-70376643 (-)
FVB/NJ MGP_FVBNJ_G0021734
protein coding gene Chr15:69318682-69390596 (-)
LP/J MGP_LPJ_G0021824
protein coding gene Chr15:73343691-73418173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021757
protein coding gene Chr15:83968423-84038638 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022349
protein coding gene Chr15:72908673-72976863 (-)
PWK/PhJ MGP_PWKPhJ_G0020921
protein coding gene Chr15:70403393-70472457 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020762
protein coding gene Chr15:72793963-72865635 (-)
WSB/EiJ MGP_WSBEiJ_G0021232
protein coding gene Chr15:72902016-72971824 (-)



Homology
more
  • Human Ortholog
    SLC45A4, solute carrier family 45 member 4
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC45A4, solute carrier family 45 member 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 57210
    neXtProt AC: NX_Q5BKX6
    UniProt: Q5BKX6

  • Chr Location
    8q24.3; chr8:141207166-141308321 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    29 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079020 Ensembl Gene Model | MGI Sequence Detail 68339 C57BL/6J ±  kb
transcript ENSMUST00000054266 Ensembl | MGI Sequence Detail 4664 Not Applicable  
polypeptide ENSMUSP00000054651 Ensembl | MGI Sequence Detail 793 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 85
    cDNA 84
    Primer pair 1

    Microarray probesets 7
References
more
  • Summaries
    All 53
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 3
    Phenotypes 29
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory