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Ttc38 Gene Detail
Summary
  • Symbol
    Ttc38
  • Name
    tetratricopeptide repeat domain 38
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146198
    NCBI Gene: 239570
Location & Maps
more
  • Sequence Map
    Chr15:85832306-85858822 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      26517 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 40.42 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TTC38, tetratricopeptide repeat domain 38
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TTC38, tetratricopeptide repeat domain 38
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LL22NC03-5H6.5
  • Links
    NCBI Gene ID: 55020
    neXtProt AC: NX_Q5R3I4

  • Chr Location
    22q13.31; chr22:46267964-46294008 (+)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    22 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Ttc38
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000033311 VEGA Gene Model | MGI Sequence Detail 26517 C57BL/6J ±  kb
transcript OTTMUST00000083583 VEGA | MGI Sequence Detail 3749 Not Applicable  
polypeptide OTTMUSP00000044946 VEGA | MGI Sequence Detail 465 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    150 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 71
    cDNA 71

    Microarray probesets 5
References
more
  • Summaries
    All 24
    Diseases 1
    Gene Ontology 1
    Phenotypes 22
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory