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Tubgcp6 Gene Detail
Summary
  • Symbol
    Tubgcp6
  • Name
    tubulin, gamma complex associated protein 6
  • Synonyms
    mKIAA1669
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146071
    NCBI Gene: 328580
  • Gene Overview
    MyGene.info: TUBGCP6
Location & Maps
more
  • Sequence Map
    Chr15:89098357-89123087 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24731 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 44.61 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TUBGCP6, tubulin gamma complex associated protein 6
  • Vertebrate Orthologs
    6
  • Human Ortholog
    TUBGCP6, tubulin gamma complex associated protein 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    GCP6, GCP-6, MCCRP, MCCRP1, MCPHCR
  • Links
    NCBI Gene ID: 85378
    neXtProt AC: NX_Q96RT7

  • Chr Location
    22q13.31-q13.33; chr22:50217689-50245024 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human TUBGCP6 associations

Human Disease Mouse Models
       Microcephaly and Chorioretinopathy, Autosomal Recessive, 1; MCCRP1   OMIM: 251270
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    21 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    2
  • Genomic Mutations
    3 involving Tubgcp6
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021006 VEGA Gene Model | MGI Sequence Detail 24731 C57BL/6J ±  kb
transcript OTTMUST00000049659 VEGA | MGI Sequence Detail 7635 Not Applicable  
polypeptide OTTMUSP00000023045 VEGA | MGI Sequence Detail 1769 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    70 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR007259 Gamma-tubulin complex component protein
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 5
References
more
  • Summaries
    All 22
    Diseases 1
    Gene Ontology 4
    Phenotypes 21
  • Earliest
    J:86686 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Aug 31;10(4):167-80
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory