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Tubgcp6
Gene Detail
Symbol

Name
ID
Tubgcp6
tubulin, gamma complex associated protein 6
MGI:2146071
Synonyms
mKIAA1669
Feature Type
protein coding gene
Genetic Map
Chromosome 15
44.61 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr15:89098357-89123087 bp, - strand
From VEGA annotation of GRCm38

  24731 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32477  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken

Gene Tree: Tubgcp6

Human
homologs
Human Homolog TUBGCP6, tubulin, gamma complex associated protein 6
NCBI Gene ID 85378
neXtProt AC  NX_Q96RT7
Human Synonyms  GCP6, GCP-6, MCCRP, MCPHCR
Human Chr (Location)  22q13.31-q13.33; chr22:50217689-50245024 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human TUBGCP6
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Radiation induced(1) Targeted(2)
Genomic Mutations involving Tubgcp6 (1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tubgcp6 interacts with 265 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process microtubule nucleation
Component centrosome, extracellular vesicular exosome, ...
Function microtubule binding
External Resources: FuncBase
Expression
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000021006 (Evidence)
Ensembl Gene ModelENSMUSG00000051786 (Evidence)
Entrez Gene328580 (Evidence)
NIA Mouse Gene IndexU036519
Consensus CDS ProjectCCDS49697.1
International Mouse Knockout Project StatusTubgcp6
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021006 VEGA Gene Model | MGI Sequence Detail 24731 C57BL/6J ±  kb
transcript OTTMUST00000049659 VEGA | MGI Sequence Detail 7635 Not Applicable 
polypeptide OTTMUSP00000023045 VEGA | MGI Sequence Detail 1769 Not Applicable 

For the selected sequences
All sequences(83) RefSeq(12) UniProt(18)
Polymorphisms
SNPs within 2kb(70 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007259 Spc97/Spc98
Protein Ontology PR:000016831 gamma-tubulin complex component 6
References
(Earliest) J:86686 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Aug 31;10(4):167-80
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(23)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory