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Ccdc65 Gene Detail
Summary
  • Symbol
    Ccdc65
  • Name
    coiled-coil domain containing 65
  • Synonyms
    4933417K04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2146001
    NCBI Gene: 105833
Location & Maps
more
  • Sequence Map
    Chr15:98708227-98723336 bp, + strand
  • From NCBI annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      15110 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 15, 54.65 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CCDC65, coiled-coil domain containing 65
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC65, coiled-coil domain containing 65
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CFAP250, CILD27, DRC2, FAP250, NYD-SP28
  • Links
    NCBI Gene ID: 85478
    neXtProt AC: NX_Q8IXS2

  • Chr Location
    12q13.12; chr12:48904110-48921576 (+)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human CCDC65 associations

Human Disease Mouse Models
       Ciliary Dyskinesia, Primary, 27; CILD27   OMIM: 615504
Click on a disease name to see all genes associated with that disease.

  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    19 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Targeted
    1
  • Genomic Mutations
    3 involving Ccdc65
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 105833 NCBI Gene Model | MGI Sequence Detail 15110 C57BL/6J ±  kb
transcript NM_153518 RefSeq | MGI Sequence Detail 1880 ICR  
polypeptide Q8VHI7 UniProt | EBI | MGI Sequence Detail 493 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    93 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000030932 coiled-coil domain-containing protein 65
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 2
Other
Accession IDs
less
MGI:2146134
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 19
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory