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Kctd12
Gene Detail
 Symbol
Name
ID
Kctd12
potassium channel tetramerisation domain containing 12
MGI:2145823
BioType Conflict
Synonyms Pfet1, Pfetin
Feature Type protein coding gene
Genetic Map
Chromosome 14
51.55 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:102976581-102982637 bp, - strand
From VEGA annotation of GRCm38

  6057 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16316  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 2 zebrafish

Human
homologs
Human Homolog KCTD12, potassium channel tetramerization domain containing 12
NCBI Gene ID 115207
neXtProt AC  NX_Q96CX2
Human Synonyms  C13orf2, PFET1, PFETIN
Human Chr (Location)  13q22.3; chr13:76880169-76886405 (-)  GRCh38
Gene Ontology
(GO)
classifications
All GO classifications: (12 annotations)
Process protein homooligomerization, regulation of G-protein coupled receptor protein signaling pathway
Component cell junction, extracellular vesicular exosome, ...
Function poly(A) RNA binding, protein binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (47)    Tissues (32)    Images (2)
Theiler Stages: 6, 7, 9, 11, 13, 15, 17, 19, 20, 21, 22, 23, 24, 25, 26, 28
Assay TypeResults
Immunohistochemistry 11
RNA in situ 2
Northern blot 34
cDNA source data(18)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress
Molecular
reagents
All nucleic(22) cDNA(18) Primer pair(3) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000044960 (Evidence)
Ensembl Gene ModelENSMUSG00000048107 (Evidence), ENSMUSG00000098557 (Evidence)
Entrez Gene239217 (Evidence)
DFCITC1584642, TC1597453
DoTSDT.94157500, DT.97350280
NIA Mouse Gene IndexU035872
Consensus CDS ProjectCCDS70611.1
International Mouse Knockout Project StatusKctd12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044960 VEGA Gene Model | MGI Sequence Detail 6057 C57BL/6J ±  kb
transcript OTTMUST00000118155 VEGA | MGI Sequence Detail 6057 Not Applicable 
polypeptide OTTMUSP00000065973 VEGA | MGI Sequence Detail 327 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(2) UniProt(5)
Polymorphisms SNPs within 2kb(9 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011333 BTB/POZ fold
InterPro IPR000210 BTB/POZ-like
InterPro IPR003131 Potassium channel tetramerisation-type BTB domain
Protein Ontology PR:000030477 BTB/POZ domain-containing protein KCTD12
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(32)
Other
accession IDs
MGI:2145763

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory