Kctd12
Gene Detail

Symbol Name ID

Kctd12 potassium channel tetramerisation domain containing 12 MGI:2145823

BioType Conflict

Synonyms

Pfet1, Pfetin

Feature Type

protein coding gene

Genetic Map

Chromosome 14

51.55 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr14:102978220-102982528 bp, - strand From Ensembl annotation of GRCm38   4309 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:16316  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 2 zebrafish

Gene Tree: Kctd12

Human homologs

Human Homolog		KCTD12, potassium channel tetramerization domain containing 12
NCBI Gene ID		115207
neXtProt AC		NX_Q96CX2
Human Synonyms		C13orf2, PFET1, PFETIN
Human Chr (Location)		13q22.3; chr13:77454304-77460540 (-)  GRCh37.p10

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	protein homooligomerization, regulation of G-protein coupled receptor protein signaling pathway
Component	cell junction, membrane, ...
Function	protein binding

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (47)    Tissues (32)    Images (2)
Theiler Stages: 6, 7, 9, 11, 13, 15, 17, 19, 20, 21, 22, 23, 24, 25, 26, 28

Assay Type	Results
Immunohistochemistry	11
RNA in situ	2
Northern blot	34

cDNA source data(18)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress

Molecular reagents

All nucleic(22) cDNA(18) Primer pair(3) Other(1)
Microarray probesets(5)

Other database links

Ensembl Gene Model	ENSMUSG00000048107 (Evidence)
Entrez Gene	239217 (Evidence)
DFCI	TC1584642, TC1597453
DoTS	DT.94157500, DT.97350280
NIA Mouse Gene Index	U035872
International Mouse Knockout Project Status	Kctd12

Sequences

Length	Strain/Species
genomic	ENSMUSG00000048107	Ensembl Gene Model | MGI Sequence Detail	4309	C57BL/6J
transcript	ENSMUST00000060692	Ensembl | MGI Sequence Detail	3805	Not Applicable
polypeptide	Q6WVG3	UniProt | EBI | MGI Sequence Detail	327	Not Applicable

All sequences(38) RefSeq(2) UniProt(5)

Polymorphisms

SNPs within 2kb(9 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR011333	BTB/POZ fold
InterPro	IPR000210	BTB/POZ-like
InterPro	IPR003131	Potassium channel tetramerisation-type BTB domain
Protein Ontology	PR:000030477	BTB/POZ domain-containing protein KCTD12

Graphical View of Protein Domain Structure

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:197761 McKinsey GL, et al., Dlx1&2-dependent expression of Zfhx1b (Sip1, Zeb2) regulates the fate switch between cortical and striatal interneurons. Neuron. 2013 Jan 9;77(1):83-98
All references(28)

Other accession IDs

MGI:2145763