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Kctd12
Gene Detail
Symbol

Name
ID
Kctd12
potassium channel tetramerisation domain containing 12
MGI:2145823
Synonyms
Pfet1, Pfetin
Feature Type
protein coding gene
Genetic Map
Chromosome 14
51.55 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:102976581-102982637 bp, - strand
From VEGA annotation of GRCm38

  6057 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16316  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: KCTD12

Human
homologs
KCTD12, potassium channel tetramerization domain containing 12
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 115207
neXtProt AC: NX_Q96CX2

Human Synonyms: C13orf2, PFET1, PFETIN

Human Chr (Location): 13q22.3; chr13:76880169-76886405 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from CvDC )
Interactions
Kctd12 interacts with 100 markers (Mir7-2, Mir7b, Mir9-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (5 records)
Data Summary: Results (47)    Tissues (33)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 11
RNA in situ 2
Northern blot 34
cDNA source data(18)
Other mouse links: Allen Institute   GENSAT   GEO   Expression Atlas
Other vertebrate links: Xenbase kctd12 ; ZFIN kctd12.1, kctd12.2    NEW 
Molecular
reagents
All nucleic(22) cDNA(18) Primer pair(3) Other(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000044960 (Evidence)
Ensembl Gene Model ENSMUSG00000098557 (Evidence), ENSMUSG00000104139 (Evidence)
Entrez Gene 239217 (Evidence)
DFCI TC1584642, TC1597453
DoTS DT.94157500, DT.97350280
NIA Mouse Gene Index U035872
Consensus CDS Project CCDS70611.1
International Mouse Phenotyping Consortium Status Kctd12
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044960 VEGA Gene Model | MGI Sequence Detail 6057 C57BL/6J ±  kb
transcript OTTMUST00000118155 VEGA | MGI Sequence Detail 6057 Not Applicable 
polypeptide OTTMUSP00000065973 VEGA | MGI Sequence Detail 327 Not Applicable 

For the selected sequences
All sequences(47) RefSeq(2) UniProt(5)
Polymorphisms
SNPs within 2kb(9 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000210 BTB/POZ domain
InterPro IPR003131 Potassium channel tetramerisation-type BTB domain
InterPro IPR011333 POZ domain
Protein Ontology PR:000030477 BTB/POZ domain-containing protein KCTD12
References
(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:221279 Turecek R, et al., Auxiliary GABAB receptor subunits uncouple G protein betagamma subunits from effector channels to induce desensitization. Neuron. 2014 Jun 4;82(5):1032-44
All references(32)
Other
accession IDs
MGI:2145763

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory