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Kctd9 Gene Detail
Summary
  • Symbol
    Kctd9
  • Name
    potassium channel tetramerisation domain containing 9
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145579
    NCBI Gene: 105440
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:67716084-67742310 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 34.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    133 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2145579
protein coding gene Chr14:67715937-67742310 (.)
129S1/SvImJ MGP_129S1SvImJ_G0021505
protein coding gene Chr14:62460979-62487353 (+)
A/J MGP_AJ_G0021464
protein coding gene Chr14:60959163-60985537 (+)
AKR/J MGP_AKRJ_G0021440
protein coding gene Chr14:63039996-63066357 (+)
BALB/cJ MGP_BALBcJ_G0021470
protein coding gene Chr14:60954032-60980407 (+)
C3H/HeJ MGP_C3HHeJ_G0021247
protein coding gene Chr14:62767449-62793803 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021909
protein coding gene Chr14:65298405-65324778 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019449
protein coding gene Chr14:58867204-58894202 (+)
CAST/EiJ MGP_CASTEiJ_G0020764
protein coding gene Chr14:59265794-59292222 (+)
CBA/J MGP_CBAJ_G0021214
protein coding gene Chr14:67307091-67333457 (+)
DBA/2J MGP_DBA2J_G0021337
protein coding gene Chr14:60592289-60618507 (+)
FVB/NJ MGP_FVBNJ_G0021316
protein coding gene Chr14:59997013-60023369 (+)
LP/J MGP_LPJ_G0021412
protein coding gene Chr14:63514615-63540989 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021345
protein coding gene Chr14:66282961-66311621 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021932
protein coding gene Chr14:62270759-62297140 (+)
PWK/PhJ MGP_PWKPhJ_G0020508
protein coding gene Chr14:57357508-57383731 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020341
protein coding gene Chr14:58213668-58240265 (+)
WSB/EiJ MGP_WSBEiJ_G0020817
protein coding gene Chr14:62599618-62626006 (+)



Homology
more
  • Human Ortholog
    KCTD9, potassium channel tetramerization domain containing 9
  • Vertebrate Orthologs
    9
  • Human Ortholog
    KCTD9, potassium channel tetramerization domain containing 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BTBD27
  • Links
    NCBI Gene ID: 54793
    neXtProt AC: NX_Q7L273
    UniProt: Q7L273

  • Chr Location
    8p21.2; chr8:25424357-25458468 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 9754
    1 human;1 mouse;1 rat;1 chimpanzee;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: KCTD9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 105440 NCBI Gene Model | MGI Sequence Detail 26227 C57BL/6J ±  kb
transcript NM_001285933 RefSeq | MGI Sequence Detail 3451 C57BL/6  
polypeptide Q80UN1 UniProt | EBI | MGI Sequence Detail 339 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 47
    cDNA 47

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145704
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory