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B3galnt2 Gene Detail
Summary
  • Symbol
    B3galnt2
  • Name
    UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2
  • Synonyms
    A930105D20Rik, D230016N13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145517
    NCBI Gene: 97884
  • Gene Overview
    MyGene.info: B3GALNT2
Location & Maps
more
  • Sequence Map
    Chr13:13954674-13999068 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      44395 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 5.29 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    B3GALNT2, beta-1,3-N-acetylgalactosaminyltransferase 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    B3GALNT2, beta-1,3-N-acetylgalactosaminyltransferase 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    B3GalNAc-T2, MDDGA11
  • Links
    NCBI Gene ID: 148789
    neXtProt AC: NX_Q8NCR0

  • Chr Location
    1q42.3; chr1:235440660-235504481 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human B3GALNT2 associations

Human Disease Mouse Models
       Muscular Dystrophy-Dystroglycanopathy (congenital with Brain and Eye Anomalies), Type A, 11; MDDGA11   OMIM: 615181
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    55
  • Gene trapped
    53
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039242 Ensembl Gene Model | MGI Sequence Detail 44395 C57BL/6J ±  kb
transcript ENSMUST00000099747 Ensembl | MGI Sequence Detail 3681 Not Applicable  
polypeptide ENSMUSP00000097336 Ensembl | MGI Sequence Detail 504 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    170 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 97
    cDNA 97

    Microarray probesets 5
Other
Accession IDs
less
MGI:2441846
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory