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Rnf44 Gene Detail
Summary
  • Symbol
    Rnf44
  • Name
    ring finger protein 44
  • Synonyms
    mKIAA1100
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145310
    NCBI Gene: 105239
  • Alliance
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:54679399-54693907 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 28.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2145310
protein coding gene Chr13:54679399-54693994 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020576
protein coding gene Chr13:54090070-54104572 (-)
A/J MGP_AJ_G0020530
protein coding gene Chr13:52105473-52119977 (-)
AKR/J MGP_AKRJ_G0020508
protein coding gene Chr13:53643018-53657542 (-)
BALB/cJ MGP_BALBcJ_G0020526
protein coding gene Chr13:52341312-52355816 (-)
C3H/HeJ MGP_C3HHeJ_G0020325
protein coding gene Chr13:53465817-53480321 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020960
protein coding gene Chr13:55751693-55766198 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018542
protein coding gene Chr13:50108062-50118091 (-)
CAST/EiJ MGP_CASTEiJ_G0019839
protein coding gene Chr13:53545803-53560297 (-)
CBA/J MGP_CBAJ_G0020285
protein coding gene Chr13:57864577-57879083 (-)
DBA/2J MGP_DBA2J_G0020408
protein coding gene Chr13:51673573-51688077 (-)
FVB/NJ MGP_FVBNJ_G0020387
protein coding gene Chr13:51123530-51138034 (-)
LP/J MGP_LPJ_G0020484
protein coding gene Chr13:54366485-54380976 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020416
protein coding gene Chr13:57362469-57376991 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021003
protein coding gene Chr13:53236054-53250556 (-)
PWK/PhJ MGP_PWKPhJ_G0019595
protein coding gene Chr13:51664796-51679436 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019422
protein coding gene Chr13:52149416-52163896 (-)
WSB/EiJ MGP_WSBEiJ_G0019901
protein coding gene Chr13:53568971-53583462 (-)



Homology
more
  • Human Ortholog
    RNF44, ring finger protein 44
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RNF44, ring finger protein 44
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 22838
    neXtProt AC: NX_Q7L0R7
    UniProt: Q7L0R7

  • Chr Location
    5q35.2; chr5:176526699-176543456 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 8934
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: RNF44
  • Gene Tree
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    66
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    62
  • Targeted
    2
  • Genomic Mutations
    2 involving Rnf44
  • Incidental Mutations
    APF , CvDC
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034928 Ensembl Gene Model | MGI Sequence Detail 14509 C57BL/6J ±  kb
transcript ENSMUST00000125871 Ensembl | MGI Sequence Detail 4292 Not Applicable  
polypeptide ENSMUSP00000118474 Ensembl | MGI Sequence Detail 432 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 4
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 1
    Phenotypes 13
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory