C87198 MGI Mouse Gene Detail - MGI:2145128

Sequence Map

Chr12:56637844-56641339 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2145128	lncRNA gene	Chr12:56637844-56641781 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036903	sense intronic lncRNA gene	Chr12:55712242-55716193 (+)
A/J	MGP_AJ_G0036891	sense intronic lncRNA gene	Chr12:53685428-53689365 (+)
AKR/J	MGP_AKRJ_G0036838	sense intronic lncRNA gene	Chr12:55384391-55388326 (+)
BALB/cJ	MGP_BALBcJ_G0036882	sense intronic lncRNA gene	Chr12:54035581-54039518 (+)
C3H/HeJ	MGP_C3HHeJ_G0036567	sense intronic lncRNA gene	Chr12:55452993-55456930 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037395	sense intronic lncRNA gene	Chr12:57358650-57362587 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034455	sense intronic lncRNA gene	Chr12:52151348-52155605 (+)
CAST/EiJ	MGP_CASTEiJ_G0035756	sense intronic lncRNA gene	Chr12:50337226-50341180 (+)
CBA/J	MGP_CBAJ_G0036542	sense intronic lncRNA gene	Chr12:59384465-59388402 (+)
DBA/2J	MGP_DBA2J_G0036719	sense intronic lncRNA gene	Chr12:53590378-53594315 (+)
FVB/NJ	MGP_FVBNJ_G0036670	sense intronic lncRNA gene	Chr12:52888497-52892448 (+)
LP/J	MGP_LPJ_G0036765	sense intronic lncRNA gene	Chr12:55684839-55688790 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036676	sense intronic lncRNA gene	Chr12:60941709-60945646 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037511	sense intronic lncRNA gene	Chr12:54822859-54826792 (+)
PWK/PhJ	MGP_PWKPhJ_G0035450	sense intronic lncRNA gene	Chr12:47953935-47957832 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035261	sense intronic lncRNA gene	Chr12:49258062-49264441 (+)
WSB/EiJ	MGP_WSBEiJ_G0035956	sense intronic lncRNA gene	Chr12:55344572-55348503 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	97836	NCBI Gene Model \| MGI Sequence Detail	3496	C57BL/6J	± kb
	transcript	NR_046002	RefSeq \| MGI Sequence Detail	603	C57BL/6

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Summaries

All 10

Phenotypes 2
Earliest

J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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