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Cep170b Gene Detail
Summary
  • Symbol
    Cep170b
  • Name
    centrosomal protein 170B
  • Synonyms
    AW555464, mKIAA0284
  • Feature Type
    protein coding gene
  • IDs
    MGI:2145043
    NCBI Gene: 217882
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:112721514-112746592 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 61.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    340 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2145043
 protein coding gene Chr12:112720455-112746592 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020158
 protein coding gene Chr12:115193819-115218214 (+)
A/J MGP_AJ_G0020114
 protein coding gene Chr12:110752442-110776936 (+)
AKR/J MGP_AKRJ_G0020089
 protein coding gene Chr12:113946642-113974424 (+)
BALB/cJ MGP_BALBcJ_G0020099
 protein coding gene Chr12:111196845-111221245 (+)
C3H/HeJ MGP_C3HHeJ_G0019901
 protein coding gene Chr12:114454773-114479264 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020544
 protein coding gene Chr12:118757063-118783514 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018158
 protein coding gene Chr12:107182300-107206834 (+)
CAST/EiJ MGP_CASTEiJ_G0019441
 protein coding gene Chr12:109303035-109327448 (+)
CBA/J MGP_CBAJ_G0019868
 protein coding gene Chr12:123290756-123315247 (+)
DBA/2J MGP_DBA2J_G0019985
 protein coding gene Chr12:110231379-110255792 (+)
FVB/NJ MGP_FVBNJ_G0019970
 protein coding gene Chr12:109059174-109085587 (+)
LP/J MGP_LPJ_G0020059
 protein coding gene Chr12:115024785-115049184 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020008
 protein coding gene Chr12:126374711-126402054 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020573
 protein coding gene Chr12:113470471-113494944 (+)
PWK/PhJ MGP_PWKPhJ_G0019203
 protein coding gene Chr12:104891105-104915563 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019007
 protein coding gene Chr12:107631871-107656432 (+)
WSB/EiJ MGP_WSBEiJ_G0019501
 protein coding gene Chr12:114377822-114402302 (+)



Homology
more
  • Human Ortholog
    CEP170B, centrosomal protein 170B
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CEP170B, centrosomal protein 170B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEP170R, FAM68C, KIAA0284
  • Links
    NCBI Gene ID: 283638
    neXtProt AC: NX_Q9Y4F5
    UniProt: Q9Y4F5

  • Chr Location
    14q32.33; chr14:104865313-104896770 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    748
  • Tissues
    21
  • cDNA Data
    97
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 217882 NCBI Gene Model | MGI Sequence Detail 25079 C57BL/6J ±  kb
transcript NM_001024602 RefSeq | MGI Sequence Detail 6640 C57BL/6  
polypeptide Q80U49 UniProt | EBI | MGI Sequence Detail 1574 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR029300 CEP170, C-terminal
    IPR000253 Forkhead-associated (FHA) domain
    IPR008984 SMAD/FHA domain superfamily
Molecular
Reagents
less
  • All nucleic 97
    cDNA 97

    Microarray probesets 2
Other
Accession IDs
less
MGI:2445826
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:75291 Witherden AS, et al., An integrated genetic, radiation hybrid, physical and transcription map of a region of distal mouse chromosome 12, including an imprinted locus and the 'Legs at odd angles' (Loa) mutation. Gene. 2002 Jan 23;283(1-2):71-82
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/23/2021
MGI 6.16 		The Jackson Laboratory