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Tecpr2
Gene Detail
Symbol

Name
ID
Tecpr2
tectonin beta-propeller repeat containing 2
MGI:2144865
Synonyms
4930573I19Rik, mKIAA0297
Feature Type
protein coding gene
Genetic Map
Chromosome 12
60.86 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:110889264-110972394 bp, + strand
From Ensembl annotation of GRCm38

  83131 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8897  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TECPR2
Gene Tree: Tecpr2

Human
homologs
TECPR2, tectonin beta-propeller repeat containing 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9895
neXtProt AC: NX_O15040

Human Synonyms: KIAA0329, SPG49

Human Chr (Location): 14q32.31; chr14:102362963-102502481 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human TECPR2

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(10) Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Tecpr2 interacts with 366 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (8)    Tissues (1)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 8
cDNA source data(51)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tecpr2    NEW 
Molecular
reagents
All nucleic(51) cDNA(51)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000021275 (Evidence)
Entrez Gene 104859 (Evidence)
UniGene 35583
DFCI TC1614163, TC1641234
DoTS DT.482752, DT.101174781, DT.87041787
NIA Mouse Gene Index U014418
Consensus CDS Project CCDS36562.1
International Mouse Phenotyping Consortium Status Tecpr2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021275 Ensembl Gene Model | MGI Sequence Detail 83131 C57BL/6J ±  kb
transcript ENSMUST00000169597 Ensembl | MGI Sequence Detail 7830 Not Applicable 
polypeptide ENSMUSP00000126749 Ensembl | MGI Sequence Detail 1423 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(16) UniProt(4)
Polymorphisms
SNPs within 2kb(431 from dbSNP Build 137)    SNPs within 2kb including multiple locations(445)
Protein-related
information
ResourceIDDescription
InterPro IPR006624 Beta-propeller repeat TECPR
InterPro IPR001680 WD40 repeat
InterPro IPR017986 WD40-repeat-containing domain
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000032286 tectonin beta-propeller repeat-containing protein 2
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/30/2015
MGI 5.22
The Jackson Laboratory