About   Help   FAQ
Sfta3 Gene Detail
Summary
  • Symbol
    Sfta3
  • Name
    surfactant associated 3
  • Synonyms
    E030019B13Rik, Nanci, Sfta3-ps
Location &
Maps
more
  • Sequence Map
    Chr12:56537213-56576205 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 24.40 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    968 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144804
 lncRNA gene Chr12:56535106-56576515 (-)
129S1/SvImJ ENSMUSG00200031768
 lncRNA gene Chr12:48444807-48485745 (-)
A/J ENSMUSG00195001702
 lncRNA gene Chr12:51011671-51052621 (-)
AKR/J ENSMUSG00220027140
 lncRNA gene Chr12:49030078-49071038 (-)
BALB/cJ ENSMUSG00180006260
 lncRNA gene Chr12:50032594-50073537 (-)
C3H/HeJ ENSMUSG00175017222
 lncRNA gene Chr12:53073661-53114609 (-)
C57BL/6NJ ENSMUSG00215016583
 lncRNA gene Chr12:49379136-49420418 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005009207
 lncRNA gene Chr12:49477799-49518814 (-)
CBA/J ENSMUSG00210010002
 lncRNA gene Chr12:49547971-49588913 (-)
DBA/2J ENSMUSG00185001366
 lncRNA gene Chr12:51493256-51534195 (-)
FVB/NJ ENSMUSG00205015253
 lncRNA gene Chr12:49339090-49380014 (-)
JF1/MsJ ENSUMUG00000009500
 lncRNA gene Chr12:55585677-55626610 (-)
LP/J ENSMUSG00230016307
 lncRNA gene Chr12:58521711-58562644 (-)
NOD/ShiLtJ ENSMUSG00190016308
 lncRNA gene Chr12:48541693-48582622 (-)
NZO/HlLtJ ENSMUSG00225041042
 lncRNA gene Chr12:60669938-60710779 (-)
PWK/PhJ ENSLUMG00010017058
 lncRNA gene Chr12:49626476-49667610 (-)
SPRET/EiJ ENSMSPG00010011567
 lncRNA gene Chr12:51115849-51156824 (-)
WSB/EiJ ENSIUOG00005003554
 lncRNA gene Chr12:49387329-49428237 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    662
  • Tissues
    29
  • cDNA Data
    8
  • Literature Summary
    3
Sequences &
Gene Models
less
  • All Sequences
    67
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 104798 NCBI Gene Model | MGI Sequence Detail 38993 C57BL/6J ±  kb
transcript NR_045082 RefSeq | MGI Sequence Detail 2305 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 8
    Primer pair 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:5903293, MGI:7764902
References
more
  • Summaries
    All 17
    Developmental Gene Expression 3
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:267472 Steimle JD, et al., Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development. Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):E10615-E10624
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory