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Slc25a47 Gene Detail
Summary
  • Symbol
    Slc25a47
  • Name
    solute carrier family 25, member 47
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144766
    NCBI Gene: 104910
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:108849833-108856815 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 59.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144766
protein coding gene Chr12:108836046-108856815 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020110
protein coding gene Chr12:111011852-111017537 (+)
A/J MGP_AJ_G0020064
protein coding gene Chr12:106788681-106794375 (+)
AKR/J MGP_AKRJ_G0020040
protein coding gene Chr12:109880715-109888848 (+)
BALB/cJ MGP_BALBcJ_G0020050
protein coding gene Chr12:107211775-107217460 (+)
C3H/HeJ MGP_C3HHeJ_G0019852
protein coding gene Chr12:110334840-110340537 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020495
protein coding gene Chr12:114426667-114432475 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018107
protein coding gene Chr12:103306299-103312067 (+)
CAST/EiJ MGP_CASTEiJ_G0019394
protein coding gene Chr12:105279064-105284835 (+)
CBA/J MGP_CBAJ_G0019819
protein coding gene Chr12:118991661-118997358 (+)
DBA/2J MGP_DBA2J_G0019936
protein coding gene Chr12:106326129-106331823 (+)
FVB/NJ MGP_FVBNJ_G0019921
protein coding gene Chr12:105112047-105118432 (+)
LP/J MGP_LPJ_G0020011
protein coding gene Chr12:110874797-110880482 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019959
protein coding gene Chr12:122130449-122136146 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020524
protein coding gene Chr12:109371516-109377201 (+)
PWK/PhJ MGP_PWKPhJ_G0019153
protein coding gene Chr12:100948344-100954164 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018957
protein coding gene Chr12:103576025-103583201 (+)
WSB/EiJ MGP_WSBEiJ_G0019451
protein coding gene Chr12:110309732-110315426 (+)



Homology
more
  • Human Ortholog
    SLC25A47, solute carrier family 25 member 47
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC25A47, solute carrier family 25 member 47
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C14orf68, HDMCP, HMFN1655
  • Links
    NCBI Gene ID: 283600
    neXtProt AC: NX_Q6Q0C1
    UniProt: Q6Q0C1

  • Chr Location
    14q32.2; chr14:100323342-100330378 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 104910 NCBI Gene Model | MGI Sequence Detail 6983 C57BL/6J ±  kb
transcript NM_001012310 RefSeq | MGI Sequence Detail 1609 C57BL/6  
polypeptide Q6IS41 UniProt | EBI | MGI Sequence Detail 310 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 51
    cDNA 51

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144916
References
more
  • Summaries
    All 29
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:93991 Tan MG, et al., Cloning and identification of hepatocellular carcinoma down-regulated mitochondrial carrier protein, a novel liver-specific uncoupling protein. J Biol Chem. 2004 Oct 22;279(43):45235-44
  • Latest
    J:246981 Jin X, et al., Effect of miR-146 targeted HDMCP up-regulation in the pathogenesis of nonalcoholic steatohepatitis. PLoS One. 2017;12(3):e0174218

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
01/07/2020
MGI 6.14
The Jackson Laboratory