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Rundc1
Gene Detail
 Symbol
Name
ID
Rundc1
RUN domain containing 1
MGI:2144506
Feature Type protein coding gene
Genetic Map
Chromosome 11
65.00 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:101425085-101435673 bp, + strand
From VEGA annotation of GRCm38

  10589 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:15095  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: Rundc1

Human
homologs
Human Homolog RUNDC1, RUN domain containing 1
NCBI Gene ID 146923
neXtProt AC  NX_Q96C34
Human Chr (Location)  17q21.31; chr17:42980510-42993696 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(3) Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rundc1 interacts with 168 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (28)    Tissues (28)    Images (8)
Theiler Stages: 19, 23, 28
Assay TypeResults
RNA in situ 28
cDNA source data(48)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(48) cDNA(48)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000002871 (Evidence)
Ensembl Gene ModelENSMUSG00000035007 (Evidence)
Entrez Gene217201 (Evidence)
UniGene305941
DFCITC1581416, TC1619438, TC1645182
NIA Mouse Gene IndexU013367
Consensus CDS ProjectCCDS25469.1
International Mouse Knockout Project StatusRundc1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002871 VEGA Gene Model | MGI Sequence Detail 10589 C57BL/6J ±  kb
transcript OTTMUST00000005873 VEGA | MGI Sequence Detail 3223 Not Applicable 
polypeptide OTTMUSP00000002774 VEGA | MGI Sequence Detail 615 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(173 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004012 RUN
Protein Ontology PR:000014360 RUN domain-containing protein 1
References (Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory