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Ccdc117 Gene Detail
Summary
  • Symbol
    Ccdc117
  • Name
    coiled-coil domain containing 117
  • Synonyms
    1110004K02Rik, 1700026O03Rik, MGC:30640
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144383
    NCBI Gene: 104479
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:5528887-5542187 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 3.61 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    32 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144383
protein coding gene Chr11:5528887-5542217 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018002
protein coding gene Chr11:2592205-2606779 (-)
A/J MGP_AJ_G0017975
protein coding gene Chr11:2497869-2510870 (-)
AKR/J MGP_AKRJ_G0017939
protein coding gene Chr11:2631685-2644949 (-)
BALB/cJ MGP_BALBcJ_G0017943
protein coding gene Chr11:2487683-2501101 (-)
C3H/HeJ MGP_C3HHeJ_G0017756
protein coding gene Chr11:2503929-2516847 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018395
protein coding gene Chr11:2660798-2675908 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016053
protein coding gene Chr11:2389167-2401660 (-)
CAST/EiJ MGP_CASTEiJ_G0017318
protein coding gene Chr11:2464845-2479105 (-)
CBA/J MGP_CBAJ_G0017731
protein coding gene Chr11:2985735-3001911 (-)
DBA/2J MGP_DBA2J_G0017841
protein coding gene Chr11:2396457-2409575 (-)
FVB/NJ MGP_FVBNJ_G0017833
protein coding gene Chr11:2437797-2450566 (-)
LP/J MGP_LPJ_G0017912
protein coding gene Chr11:2666422-2681380 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017859
protein coding gene Chr11:2615963-2634443 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018435
protein coding gene Chr11:2614568-2629653 (-)
PWK/PhJ MGP_PWKPhJ_G0017098
protein coding gene Chr11:2424295-2438594 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016895
protein coding gene Chr11:2604909-2617406 (-)
WSB/EiJ MGP_WSBEiJ_G0017372
protein coding gene Chr11:2475007-2491274 (-)



Homology
more
  • Human Ortholog
    CCDC117, coiled-coil domain containing 117
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CCDC117, coiled-coil domain containing 117
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ366L4.1
  • Links
    NCBI Gene ID: 150275
    neXtProt AC: NX_Q8IWD4
    UniProt: Q8IWD4

  • Chr Location
    22q12.1; chr22:28772674-28789301 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020482 Ensembl Gene Model | MGI Sequence Detail 13301 C57BL/6J ±  kb
transcript ENSMUST00000020776 Ensembl | MGI Sequence Detail 3372 Not Applicable  
polypeptide ENSMUSP00000020776 Ensembl | MGI Sequence Detail 277 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 124
    cDNA 123
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
less
MGI:1914941, MGI:1915705, MGI:2144434, MGI:2144462
References
more
  • Summaries
    All 29
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:276152 Horton AJ, et al., Nkx2-5 Second Heart Field Target Gene Ccdc117 Regulates DNA Metabolism and Proliferation. Sci Rep. 2019 Feb 11;9(1):1738

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory