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Clint1 Gene Detail
Summary
  • Symbol
    Clint1
  • Name
    clathrin interactor 1
  • Synonyms
    C530049I24Rik, Epn4, mKIAA0171
  • Feature Type
    protein coding gene
  • IDs
    MGI:2144243
    NCBI Gene: 216705
  • Gene Overview
    MyGene.info: CLINT1
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:45852051-45910625 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 27.45 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    248 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2144243
protein coding gene Chr11:45851932-45910625 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018184
protein coding gene Chr11:44733545-44793609 (+)
A/J MGP_AJ_G0018156
protein coding gene Chr11:43018295-43077184 (+)
AKR/J MGP_AKRJ_G0018120
protein coding gene Chr11:44258397-44319107 (+)
BALB/cJ MGP_BALBcJ_G0018125
protein coding gene Chr11:43185090-43243080 (+)
C3H/HeJ MGP_C3HHeJ_G0017939
protein coding gene Chr11:44301589-44366015 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018579
protein coding gene Chr11:46060564-46122697 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016234
protein coding gene Chr11:41017179-41075525 (+)
CAST/EiJ MGP_CASTEiJ_G0017502
protein coding gene Chr11:44408891-44468049 (+)
CBA/J MGP_CBAJ_G0017911
protein coding gene Chr11:48220812-48287024 (+)
DBA/2J MGP_DBA2J_G0018021
protein coding gene Chr11:42771567-42830054 (+)
FVB/NJ MGP_FVBNJ_G0018015
protein coding gene Chr11:42451164-42509767 (+)
LP/J MGP_LPJ_G0018093
protein coding gene Chr11:44965873-45035217 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018039
protein coding gene Chr11:49778819-49837966 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018618
protein coding gene Chr11:44424473-44486412 (+)
PWK/PhJ MGP_PWKPhJ_G0017282
protein coding gene Chr11:42848679-42906427 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017075
protein coding gene Chr11:44210150-44268853 (+)
WSB/EiJ MGP_WSBEiJ_G0017552
protein coding gene Chr11:44119520-44179314 (+)



Homology
more
  • Human Ortholog
    CLINT1, clathrin interactor 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CLINT1, clathrin interactor 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CLINT, ENTH, EPN4, EPNR
  • Links
    NCBI Gene ID: 9685
    neXtProt AC: NX_Q14677
    UniProt: Q14677

  • Chr Location
    5q33.3; chr5:157785743-157859175 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000006169 Ensembl Gene Model | MGI Sequence Detail 58575 C57BL/6J ±  kb
transcript ENSMUST00000109261 Ensembl | MGI Sequence Detail 3365 Not Applicable  
polypeptide ENSMUSP00000104884 Ensembl | MGI Sequence Detail 641 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
Other
Accession IDs
less
MGI:2148016, MGI:2444042
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 9
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory