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Tbc1d10a
Gene Detail
Symbol

Name
ID
Tbc1d10a
TBC1 domain family, member 10a
MGI:2144164
Synonyms
EPI64, Tbc1d10
Feature Type
protein coding gene
Genetic Map
Chromosome 11
2.92 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:4186789-4215505 bp, + strand
From VEGA annotation of GRCm38

  28717 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:32762  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 3 zebrafish

HCOP human homology predictions: TBC1D10A
Gene Tree: Tbc1d10a

Human
homologs
TBC1D10A, TBC1 domain family, member 10A
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 83874
neXtProt AC: NX_Q9BXI6

Human Synonyms: dJ130H16.1, dJ130H16.2, EPI64, TBC1D10

Human Chr (Location): 22q12.2; chr22:30291990-30326966 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(1) Targeted(6)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tbc1d10a interacts with 55 markers (Mir34c, Mir107, Mir122, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (14)    Tissues (2)    Images (13)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 14
cDNA source data(47)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tbc1d10a    NEW 
Molecular
reagents
All nucleic(47) cDNA(47)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000005055 (Evidence)
Ensembl Gene Model ENSMUSG00000034412 (Evidence)
Entrez Gene 103724 (Evidence)
UniGene 28140
DFCI TC1605366, TC1578060
DoTS DT.489667, DT.91284076
NIA Mouse Gene Index U012269
Consensus CDS Project CCDS56756.1
International Mouse Phenotyping Consortium Status Tbc1d10a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005055 VEGA Gene Model | MGI Sequence Detail 28717 C57BL/6J ±  kb
transcript OTTMUST00000011265 VEGA | MGI Sequence Detail 1957 Not Applicable 
polypeptide OTTMUSP00000005250 VEGA | MGI Sequence Detail 534 Not Applicable 

For the selected sequences
All sequences(46) RefSeq(4) UniProt(6)
Polymorphisms
SNPs within 2kb(69 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000195 Rab-GTPase-TBC domain
Protein Ontology PR:000029779 TBC1 domain family member 10A
References
(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:213427 Adissu HA, et al., Histopathology reveals correlative and unique phenotypes in a high-throughput mouse phenotyping screen. Dis Model Mech. 2014 May;7(5):515-24
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory