Arhgap9
Gene Detail

Symbol Name ID

Arhgap9 Rho GTPase activating protein 9 MGI:2143764

Feature Type

protein coding gene

Genetic Map

Chromosome 10

74.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr10:127323727-127329943 bp, + strand From NCBI annotation of GRCm38   6217 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:13041  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Arhgap9

Human homologs

Human Homolog		ARHGAP9, Rho GTPase activating protein 9
NCBI Gene ID		64333
neXtProt AC		NX_Q9BRR9
Human Synonyms		10C, RGL1
Human Chr (Location)		12q13.3; chr12:57866038-57873633 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human ARHGAP9

Alleles and phenotypes

All alleles(54) : Targeted(2) Gene trapped(52)

Gene Ontology (GO) classifications

All GO classifications: (3 annotations)

Process	positive regulation of GTPase activity
Component	cellular_component
Function	GTPase activator activity

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (6)    Tissues (1)    Images (6)
Theiler Stages: 23

Assay Type	Results
RNA in situ	6

cDNA source data(12)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(12) cDNA(12)
Microarray probesets(7)

Other database links

Ensembl Gene Model	ENSMUSG00000040345 (Evidence)
Entrez Gene	216445 (Evidence)
NIA Mouse Gene Index	U012148
Consensus CDS Project	CCDS36079.1
International Mouse Knockout Project Status	Arhgap9

Sequences

Length	Strain/Species
genomic	216445	NCBI Gene Model | MGI Sequence Detail	6217	C57BL/6J
transcript	NM_146011	RefSeq | MGI Sequence Detail	1811	NOD
polypeptide	NP_666123	RefSeq | MGI Sequence Detail	473	NOD

All sequences(32) RefSeq(2) UniProt(7)

Polymorphisms

SNPs(27 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR001849	Pleckstrin homology domain
InterPro	IPR011993	Pleckstrin homology-like domain
InterPro	IPR015767	Rho GTPase activating
InterPro	IPR000198	Rho GTPase-activating protein domain
InterPro	IPR008936	Rho GTPase activation protein
InterPro	IPR001452	Src homology-3 domain

References

(Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)