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Arhgap9
Gene Detail
 Symbol
Name
ID
Arhgap9
Rho GTPase activating protein 9
MGI:2143764
Feature Type protein coding gene
Genetic Map
Chromosome 10
74.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:127323727-127329943 bp, + strand
From NCBI annotation of GRCm38

  6217 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13041  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Arhgap9

Human
homologs
Human Homolog ARHGAP9, Rho GTPase activating protein 9
NCBI Gene ID 64333
neXtProt AC  NX_Q9BRR9
Human Synonyms  10C, RGL1
Human Chr (Location)  12q13.3; chr12:57472255-57488621 (-)  GRCh38
Alleles
and
phenotypes
All alleles(54) : Gene trapped(52) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process positive regulation of GTPase activity
Component cellular_component
Function GTPase activator activity, phosphatidylinositol-3,4,5-trisphosphate binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (6)    Tissues (1)    Images (6)
Theiler Stages: 23
Assay TypeResults
RNA in situ 6
cDNA source data(12)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(7)
Other database
links
Ensembl Gene ModelENSMUSG00000040345 (Evidence)
Entrez Gene216445 (Evidence)
NIA Mouse Gene IndexU012148
Consensus CDS ProjectCCDS36079.1
International Mouse Knockout Project StatusArhgap9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 216445 NCBI Gene Model | MGI Sequence Detail 6217 C57BL/6J ±  kb
transcript NM_001285785 RefSeq | MGI Sequence Detail 2372 C57BL/6 
polypeptide NP_001272714 RefSeq | MGI Sequence Detail 648 C57BL/6 

For the selected sequences
All sequences(40) RefSeq(10) UniProt(7)
Polymorphisms SNPs within 2kb(35 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001849 Pleckstrin homology domain
InterPro IPR011993 Pleckstrin homology-like domain
InterPro IPR015767 Rho GTPase activating
InterPro IPR000198 Rho GTPase-activating protein domain
InterPro IPR008936 Rho GTPase activation protein
InterPro IPR001452 Src homology-3 domain
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory