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Zc3h10 Gene Detail
Summary
  • Symbol
    Zc3h10
  • Name
    zinc finger CCCH type containing 10
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143670
    NCBI Gene: 103284
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:128543563-128547744 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 77.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143670
protein coding gene Chr10:128541963-128547774 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017870
protein coding gene Chr10:132294023-132299838 (-)
A/J MGP_AJ_G0017845
protein coding gene Chr10:126978556-126984370 (-)
AKR/J MGP_AKRJ_G0017808
protein coding gene Chr10:130697622-130703468 (-)
BALB/cJ MGP_BALBcJ_G0017809
protein coding gene Chr10:127355393-127361207 (-)
C3H/HeJ MGP_C3HHeJ_G0017632
protein coding gene Chr10:130857577-130863391 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018264
protein coding gene Chr10:136775103-136780916 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015942
protein coding gene Chr10:120903940-120909751 (-)
CAST/EiJ MGP_CASTEiJ_G0017193
protein coding gene Chr10:131574803-131580619 (-)
CBA/J MGP_CBAJ_G0017602
protein coding gene Chr10:142337483-142343298 (-)
DBA/2J MGP_DBA2J_G0017708
protein coding gene Chr10:126038768-126044575 (-)
FVB/NJ MGP_FVBNJ_G0017703
protein coding gene Chr10:124961633-124967446 (-)
LP/J MGP_LPJ_G0017782
protein coding gene Chr10:132877806-132883618 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017731
protein coding gene Chr10:144916988-144922805 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018304
protein coding gene Chr10:130801571-130807385 (-)
PWK/PhJ MGP_PWKPhJ_G0016978
protein coding gene Chr10:126297439-126303416 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016767
protein coding gene Chr10:129914383-129920204 (-)
WSB/EiJ MGP_WSBEiJ_G0017252
protein coding gene Chr10:131018927-131024741 (-)



Homology
more
  • Human Ortholog
    ZC3H10, zinc finger CCCH-type containing 10
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZC3H10, zinc finger CCCH-type containing 10
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ZC3HDC10
  • Links
    NCBI Gene ID: 84872
    neXtProt AC: NX_Q96K80
    UniProt: Q96K80

  • Chr Location
    12q13.2; chr12:56118220-56122497 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 13114
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ZC3H10
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 103284 NCBI Gene Model | MGI Sequence Detail 4182 C57BL/6J ±  kb
transcript NM_134003 RefSeq | MGI Sequence Detail 2102 FVB/N  
polypeptide Q8R205 UniProt | EBI | MGI Sequence Detail 435 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 52
    cDNA 51
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 33
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 8
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory