About   Help   FAQ
Slc6a15
Gene Detail
Symbol

Name
ID
Slc6a15
solute carrier family 6 (neurotransmitter transporter), member 15
MGI:2143484
Synonyms
v7-3
Feature Type
protein coding gene
Genetic Map
Chromosome 10
53.98 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr10:103367808-103419378 bp, + strand
From Ensembl annotation of GRCm38

  51571 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18163  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLC6A15
Gene Tree: Slc6a15

Human
homologs
SLC6A15, solute carrier family 6 (neutral amino acid transporter), member 15
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55117
neXtProt AC: NX_Q9H2J7

Human Synonyms: hv7-3, NTT73, SBAT1, V7-3

Human Chr (Location): 12q21.3; chr12:84859488-84913615 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(2) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a null allele exhibit decreased synaptosome transport activities but exhibit no behavioral abnormalities.
 
Interactions
Slc6a15 interacts with 232 markers (Mir17, Mir19a, Mir19b-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (268)    Tissues (83)    Images (49)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 268
cDNA source data(38)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slc6a15    NEW 
Molecular
reagents
All nucleic(41) cDNA(40) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene Model ENSMUSG00000019894 (Evidence)
Entrez Gene 103098 (Evidence)
UniGene 458408
DFCI TC1577905, TC1595871, TC1636810
DoTS DT.101735936, DT.40176071, DT.94143404, DT.94266531
NIA Mouse Gene Index U011977
Consensus CDS Project CCDS24156.1
International Mouse Phenotyping Consortium Status Slc6a15
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019894 Ensembl Gene Model | MGI Sequence Detail 51571 C57BL/6J ±  kb
transcript ENSMUST00000179636 Ensembl | MGI Sequence Detail 3546 Not Applicable 
polypeptide ENSMUSP00000136676 Ensembl | MGI Sequence Detail 729 Not Applicable 

For the selected sequences
All sequences(41) RefSeq(10) UniProt(3)
Polymorphisms
SNPs within 2kb(465 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000175 Sodium:neurotransmitter symporter
InterPro IPR002438 Sodium:neurotransmitter symporter, orphan
Protein Ontology PR:000015181 sodium-dependent neutral amino acid transporter B(0)AT2
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:206404 Drgonova J, et al., Involvement of the neutral amino acid transporter SLC6A15 and leucine in obesity-related phenotypes. PLoS One. 2013;8(9):e68245
All references(37)
Other
accession IDs
MGI:2143583, MGI:2143584

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/25/2015
MGI 6.0
The Jackson Laboratory