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Slc22a13 Gene Detail
Summary
  • Symbol
    Slc22a13
  • Name
    solute carrier family 22 (organic cation transporter), member 13
  • Synonyms
    OCTL1, OCTL3, ORCTL3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2143107
    NCBI Gene: 102570
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:119192974-119209098 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 71.33 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    199 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2143107
protein coding gene Chr9:119192966-119209105 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0035395
protein coding gene Chr9:117410492-117426814 (-)
AKR/J MGP_AKRJ_G0035328
protein coding gene Chr9:120465597-120485430 (-)
BALB/cJ MGP_BALBcJ_G0035391
protein coding gene Chr9:117312891-117325474 (-)
C3H/HeJ MGP_C3HHeJ_G0035099
protein coding gene Chr9:120924124-120942739 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035914
protein coding gene Chr9:125274381-125294250 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032796
protein coding gene Chr9:114605314-114623028 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035066
protein coding gene Chr9:129971758-129989830 (-)
DBA/2J MGP_DBA2J_G0035225
protein coding gene Chr9:116849182-116867054 (-)
FVB/NJ MGP_FVBNJ_G0035172
protein coding gene Chr9:115698229-115715644 (-)
LP/J MGP_LPJ_G0035304
protein coding gene Chr9:122265357-122281171 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035213
protein coding gene Chr9:130985920-130990434 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035933
protein coding gene Chr9:120876662-120890755 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0033944
protein coding gene Chr9:120961830-120978154 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    SLC22A13, solute carrier family 22 member 13
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC22A13, solute carrier family 22 member 13
    Orthology source: HomoloGene, HGNC
  • Synonyms
    OAT10, OCTL1, OCTL3, ORCTL3, ORCTL-3
  • Links
    NCBI Gene ID: 9390
    neXtProt AC: NX_Q9Y226
    UniProt: Q9Y226

  • Chr Location
    3p22.2; chr3:38265807-38280030 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074028 Ensembl Gene Model | MGI Sequence Detail 16125 C57BL/6J ±  kb
transcript ENSMUST00000084797 Ensembl | MGI Sequence Detail 2001 Not Applicable  
polypeptide ENSMUSP00000081855 Ensembl | MGI Sequence Detail 551 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR005828 Major facilitator, sugar transporter-like
    IPR020846 Major facilitator superfamily domain
    IPR036259 MFS transporter superfamily
    IPR005829 Sugar transporter, conserved site
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 3
References
more
  • Summaries
    All 24
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 1
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory