Slc22a13
Gene Detail

Symbol Name ID

Slc22a13 solute carrier family 22 (organic cation transporter), member 13 MGI:2143107

Synonyms

OCTL1, OCTL3, ORCTL3

Feature Type

protein coding gene

Genetic Map

Chromosome 9

71.33 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr9:119193002-119209105 bp, - strand From Ensembl annotation of GRCm38   16104 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:3140  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 2 chicken; 1 zebrafish

Gene Tree: Slc22a13

Human homologs

Human Homolog		SLC22A13, solute carrier family 22 (organic anion transporter), member 13
NCBI Gene ID		9390
neXtProt AC		NX_Q9Y226
Human Synonyms		OAT10, OCTL1, OCTL3, ORCTL3, ORCTL-3
Human Chr (Location)		3p21.3; chr3:38307298-38319806 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Targeted(1)

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	transmembrane transport, transport
Component	integral to membrane, membrane
Function	transmembrane transporter activity, transporter activity

This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (232)    Tissues (110)    Images (31)
Theiler Stages: 22, 23

Assay Type	Results
RNA in situ	232

cDNA source data(19)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(19) cDNA(19)
Microarray probesets(3)

Other database links

Ensembl Gene Model	ENSMUSG00000074028 (Evidence)
Entrez Gene	102570 (Evidence)
UniGene	38775
DFCI	TC1583564
DoTS	DT.483622
NIA Mouse Gene Index	U031424
Consensus CDS Project	CCDS40802.1
International Mouse Knockout Project Status	Slc22a13

Sequences

Length	Strain/Species
genomic	ENSMUSG00000074028	Ensembl Gene Model | MGI Sequence Detail	16104	C57BL/6J
transcript	ENSMUST00000084797	Ensembl | MGI Sequence Detail	1980	Not Applicable
polypeptide	ENSMUSP00000081855	Ensembl | MGI Sequence Detail	551	Not Applicable

All sequences(15) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(106 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR005828	General substrate transporter
InterPro	IPR020846	Major facilitator superfamily domain
InterPro	IPR016196	Major facilitator superfamily domain, general substrate transporter
InterPro	IPR005829	Sugar transporter, conserved site
Protein Ontology	PR:000032119	solute carrier family 22 member 13

References

(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)