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Ncapd3 Gene Detail
Summary
  • Symbol
    Ncapd3
  • Name
    non-SMC condensin II complex, subunit D3
  • Synonyms
    2810487N22Rik, 4632407J06Rik, B130055D15Rik, mKIAA0056
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142989
    NCBI Gene: 78658
  • Gene Overview
    MyGene.info: NCAPD3
Location & Maps
more
  • Sequence Map
    Chr9:27030175-27095311 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      65137 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 12.12 cM, cytoband A4
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    NCAPD3, non-SMC condensin II complex subunit D3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NCAPD3, non-SMC condensin II complex subunit D3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CAPD3, CAP-D3, hCAP-D3, hcp-6, hHCP-6
  • Links
    NCBI Gene ID: 23310
    neXtProt AC: NX_P42695

  • Chr Location
    11q25; chr11:134152442-134225345 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035024 Ensembl Gene Model | MGI Sequence Detail 65137 C57BL/6J ±  kb
transcript ENSMUST00000073127 Ensembl | MGI Sequence Detail 5499 Not Applicable  
polypeptide ENSMUSP00000072871 Ensembl | MGI Sequence Detail 1506 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    214 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000011021 condensin-2 complex subunit D3
  • InterPro Domains
    IPR011989 Armadillo-like helical
    IPR016024 Armadillo-type fold
    IPR012371 Condensin-2 complex subunit D3
    IPR032682 Condensin complex subunit 1, C-terminal
    IPR026971 Condensin subunit 1/Condensin-2 complex subunit D3
Molecular
Reagents
less
  • All nucleic 117
    cDNA 116
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:1922964, MGI:1925908, MGI:2143198
References
more
  • Summaries
    All 33
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:183026 Lee J, et al., Condensins I and II are essential for construction of bivalent chromosomes in mouse oocytes. Mol Biol Cell. 2011 Sep;22(18):3465-77

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/15/2016
MGI 6.04
The Jackson Laboratory