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Cog4
Gene Detail
 Symbol
Name
ID
Cog4
component of oligomeric golgi complex 4
MGI:2142808
Synonyms D8Ertd515e
Feature Type protein coding gene
Genetic Map
Chromosome 8
57.76 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr8:110846600-110882227 bp, + strand
From VEGA annotation of GRCm38

  35628 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7155  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Cog4

Human
homologs
Human Homolog COG4, component of oligomeric golgi complex 4
NCBI Gene ID 25839
neXtProt AC  NX_Q9H9E3
Human Synonyms  CDG2J, COD1
Human Chr (Location)  16q22.1; chr16:70480569-70523554 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human COG4
Alleles
and
phenotypes
All alleles(18) : Gene trapped(16) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process Golgi organization, Golgi vesicle prefusion complex stabilization, ...
Component Golgi apparatus, Golgi transport complex, ...
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(128)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(129) cDNA(128) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000037836 (Evidence)
Ensembl Gene ModelENSMUSG00000031753 (Evidence)
Entrez Gene102339 (Evidence)
UniGene272930
DFCITC1572854, TC1614635, TC1646310
NIA Mouse Gene IndexU009825, U128320
Consensus CDS ProjectCCDS40477.1
International Mouse Knockout Project StatusCog4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037836 VEGA Gene Model | MGI Sequence Detail 35628 C57BL/6J ±  kb
transcript OTTMUST00000097598 VEGA | MGI Sequence Detail 2737 Not Applicable 
polypeptide OTTMUSP00000054747 VEGA | MGI Sequence Detail 785 Not Applicable 

For the selected sequences
All sequences(93) RefSeq(4) UniProt(9)
Polymorphisms SNPs within 2kb(167 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR013167 Conserved oligomeric Golgi complex, subunit 4
Protein Ontology PR:000005687 conserved oligomeric Golgi complex subunit 4
References (Earliest) J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(32)
Other
accession IDs
MGI:1261770

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory