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Cpne7 Gene Detail
Summary
  • Symbol
    Cpne7
  • Name
    copine VII
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142747
    NCBI Gene: 102278
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:123117374-123135182 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 72.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    199 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142747
protein coding gene Chr8:123117313-123135185 (.)
129S1/SvImJ MGP_129S1SvImJ_G0034242
protein coding gene Chr8:126710787-126728615 (+)
A/J MGP_AJ_G0034222
protein coding gene Chr8:121463732-121482058 (+)
AKR/J MGP_AKRJ_G0034149
protein coding gene Chr8:125001760-125019776 (+)
BALB/cJ MGP_BALBcJ_G0034216
protein coding gene Chr8:121663004-121680784 (+)
C3H/HeJ MGP_C3HHeJ_G0033926
protein coding gene Chr8:125698700-125716732 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034735
protein coding gene Chr8:130950622-130968232 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031677
protein coding gene Chr8:114283125-114301666 (+)
CAST/EiJ MGP_CASTEiJ_G0033254
protein coding gene Chr8:125784944-125802697 (+)
CBA/J MGP_CBAJ_G0033899
protein coding gene Chr8:135740714-135767883 (+)
DBA/2J MGP_DBA2J_G0034056
protein coding gene Chr8:120644930-120663682 (+)
FVB/NJ MGP_FVBNJ_G0033999
protein coding gene Chr8:119798989-119816933 (+)
LP/J MGP_LPJ_G0034145
protein coding gene Chr8:126845981-126866394 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034046
protein coding gene Chr8:137882290-137901015 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034754
protein coding gene Chr8:125181735-125199577 (+)
PWK/PhJ MGP_PWKPhJ_G0032955
protein coding gene Chr8:120476165-120494127 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032795
protein coding gene Chr8:123914019-123934147 (+)
WSB/EiJ MGP_WSBEiJ_G0033370
protein coding gene Chr8:125937540-125958496 (+)



Homology
more
  • Human Ortholog
    CPNE7, copine 7
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CPNE7, copine 7
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 27132
    neXtProt AC: NX_Q9UBL6
    UniProt: Q9UBL6

  • Chr Location
    16q24.3; chr16:89575768-89597246 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 65128
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CPNE7
  • Protein SuperFamily
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034796 Ensembl Gene Model | MGI Sequence Detail 17809 C57BL/6J ±  kb
transcript ENSMUST00000037900 Ensembl | MGI Sequence Detail 2398 Not Applicable  
polypeptide ENSMUSP00000042159 Ensembl | MGI Sequence Detail 557 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:86882 Creutz CE, et al., The copines, a novel class of C2 domain-containing, calcium-dependent, phospholipid-binding proteins conserved from Paramecium to humans. J Biol Chem. 1998 Jan 16;273(3):1393-402
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory