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AI429214 Gene Detail
Summary
  • Symbol
    AI429214
  • Name
    expressed sequence AI429214
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142538
    NCBI Gene: 621080
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:36993604-36995533 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 23.15 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    80 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142538
protein coding gene Chr8:36993575-36995533 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033546
protein coding gene Chr8:35684958-35686884 (+)
A/J MGP_AJ_G0033526
protein coding gene Chr8:34289080-34291006 (+)
AKR/J MGP_AKRJ_G0033450
protein coding gene Chr8:35333662-35335588 (+)
BALB/cJ MGP_BALBcJ_G0033522
protein coding gene Chr8:34387035-34388961 (+)
C3H/HeJ MGP_C3HHeJ_G0033234
protein coding gene Chr8:35711299-35713225 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034038
protein coding gene Chr8:36999096-37006000 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030987
protein coding gene Chr8:31208950-31210856 (+)
CAST/EiJ MGP_CASTEiJ_G0032561
protein coding gene Chr8:35165595-35167510 (+)
CBA/J MGP_CBAJ_G0033212
protein coding gene Chr8:38455778-38457704 (+)
DBA/2J MGP_DBA2J_G0033365
protein coding gene Chr8:34200449-34202375 (+)
FVB/NJ MGP_FVBNJ_G0033310
protein coding gene Chr8:33853158-33855084 (+)
LP/J MGP_LPJ_G0033455
protein coding gene Chr8:35649638-35651564 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033352
protein coding gene Chr8:37847928-37849854 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034057
protein coding gene Chr8:35493456-35495382 (+)
PWK/PhJ MGP_PWKPhJ_G0032271
protein coding gene Chr8:33764251-33766553 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032103
protein coding gene Chr8:34728792-34730709 (+)
WSB/EiJ MGP_WSBEiJ_G0032677
protein coding gene Chr8:35686189-35688115 (+)



Homology
more
  • Human Ortholog
    C8orf48, chromosome 8 open reading frame 48
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C8orf48, chromosome 8 open reading frame 48
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 157773
    neXtProt AC: NX_Q96LL4
    UniProt: Q96LL4

  • Chr Location
    8p22; chr8:13566843-13568288 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074384 Ensembl Gene Model | MGI Sequence Detail 1930 C57BL/6J ±  kb
transcript ENSMUST00000098825 Ensembl | MGI Sequence Detail 1930 Not Applicable  
polypeptide ENSMUSP00000096424 Ensembl | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027932 Protein of unknown function DUF4606
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 17
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory