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Faap24 Gene Detail
Summary
  • Symbol
    Faap24
  • Name
    Fanconi anemia core complex associated protein 24
  • Synonyms
    C230052I12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142208
    NCBI Gene: 101831
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:35392152-35396767 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 21.37 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    81 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2142208
protein coding gene Chr7:35392152-35396836 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032087
protein coding gene Chr7:34782843-34787525 (-)
A/J MGP_AJ_G0032067
protein coding gene Chr7:33844780-33849458 (-)
AKR/J MGP_AKRJ_G0032000
protein coding gene Chr7:34672759-34679943 (-)
BALB/cJ MGP_BALBcJ_G0032074
protein coding gene Chr7:34144510-34149188 (-)
C3H/HeJ MGP_C3HHeJ_G0031791
protein coding gene Chr7:35561475-35566158 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032551
protein coding gene Chr7:36499464-36504145 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029584
protein coding gene Chr7:34568861-34573720 (-)
CAST/EiJ MGP_CASTEiJ_G0031126
protein coding gene Chr7:26722554-26727215 (-)
CBA/J MGP_CBAJ_G0031759
protein coding gene Chr7:37636736-37641415 (-)
DBA/2J MGP_DBA2J_G0031911
protein coding gene Chr7:33697582-33702260 (-)
FVB/NJ MGP_FVBNJ_G0031866
protein coding gene Chr7:33627352-33632665 (-)
LP/J MGP_LPJ_G0031988
protein coding gene Chr7:35111539-35116217 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031904
protein coding gene Chr7:36648007-36652807 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032566
protein coding gene Chr7:34220308-34224954 (-)
PWK/PhJ MGP_PWKPhJ_G0030848
protein coding gene Chr7:27030758-27035440 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030683
protein coding gene Chr7:23785743-23790501 (-)
WSB/EiJ MGP_WSBEiJ_G0031236
protein coding gene Chr7:34765234-34769917 (-)



Homology
more
  • Human Ortholog
    FAAP24, FA core complex associated protein 24
  • Vertebrate Orthologs
    9
  • Human Ortholog
    FAAP24, FA core complex associated protein 24
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C19orf40
  • Links
    NCBI Gene ID: 91442
    neXtProt AC: NX_Q9BTP7
    UniProt: Q9BTP7

  • Chr Location
    19q13.11; chr19:32972212-32977495 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 101831 NCBI Gene Model | MGI Sequence Detail 4616 C57BL/6J ±  kb
transcript NM_178643 RefSeq | MGI Sequence Detail 1788 C57BL/6  
polypeptide Q8BHL6 UniProt | EBI | MGI Sequence Detail 221 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000007308 Fanconi anemia core complex-associated protein 24
  • InterPro Domains
    IPR041663 DisA/LigA, helix-hairpin-helix motif
    IPR026985 Fanconi anemia-associated protein of 24kDa
    IPR040646 Fanconi anemia core complex-associated protein 24, pseudonuclease domain
    IPR010994 RuvA domain 2-like
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
Other
Accession IDs
less
MGI:2142247
References
more
  • Summaries
    All 25
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory