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Alkbh6 Gene Detail
Summary
  • Symbol
    Alkbh6
  • Name
    alkB homolog 6
  • Synonyms
    Abh6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2142037
    NCBI Gene: 233065
Location & Maps
more
  • Sequence Map
    Chr7:30308717-30314304 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      5588 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 17.38 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ALKBH6, alkB homolog 6
  • Vertebrate Orthologs
    6
  • Human Ortholog
    ALKBH6, alkB homolog 6
    Orthology source: HGNC, HomoloGene
  • Synonyms
    ABH6
  • Links
    NCBI Gene ID: 84964
    neXtProt AC: NX_Q3KRA9

  • Chr Location
    19q13.12; chr19:36009116-36014243 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    3
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026579 VEGA Gene Model | MGI Sequence Detail 5588 C57BL/6J ±  kb
transcript OTTMUST00000065755 VEGA | MGI Sequence Detail 982 Not Applicable  
polypeptide OTTMUSP00000032815 VEGA | MGI Sequence Detail 238 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    101 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000003953 alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
  • EC
  • InterPro Domains
    IPR032862 Alpha-ketoglutarate-dependent dioxygenase alkB homologue 6
    IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
    IPR005123 Oxoglutarate/iron-dependent dioxygenase
Molecular
Reagents
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  • All nucleic 82
    cDNA 82

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory