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AI467606 Gene Detail
Summary
  • Symbol
    AI467606
  • Name
    expressed sequence AI467606
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141979
    NCBI Gene: 101602
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:127091359-127093986 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 69.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141979
protein coding gene Chr7:127090780-127094049 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033020
protein coding gene Chr7:131410812-131413439 (+)
A/J MGP_AJ_G0033003
protein coding gene Chr7:127920980-127923608 (+)
AKR/J MGP_AKRJ_G0032935
protein coding gene Chr7:131164481-131167111 (+)
BALB/cJ MGP_BALBcJ_G0033008
protein coding gene Chr7:127583704-127586334 (+)
C3H/HeJ MGP_C3HHeJ_G0032718
protein coding gene Chr7:131097200-131099827 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033514
protein coding gene Chr7:136515983-136518610 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030486
protein coding gene Chr7:129128727-129131414 (+)
CAST/EiJ MGP_CASTEiJ_G0032047
protein coding gene Chr7:122891661-122894283 (+)
CBA/J MGP_CBAJ_G0032691
protein coding gene Chr7:141113522-141116149 (+)
DBA/2J MGP_DBA2J_G0032843
protein coding gene Chr7:125893679-125896306 (+)
FVB/NJ MGP_FVBNJ_G0032796
protein coding gene Chr7:125744692-125747319 (+)
LP/J MGP_LPJ_G0032937
protein coding gene Chr7:132880567-132883194 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032828
protein coding gene Chr7:142268843-142271472 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033533
protein coding gene Chr7:130171191-130173821 (+)
PWK/PhJ MGP_PWKPhJ_G0031754
protein coding gene Chr7:118891266-118893883 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031600
protein coding gene Chr7:117014839-117017478 (+)
WSB/EiJ MGP_WSBEiJ_G0032159
protein coding gene Chr7:131152621-131155249 (+)



Homology
more
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 283897
    neXtProt AC: NX_Q6UWD8
    UniProt: Q6UWD8

  • Chr Location
    16p11.2; chr16:29742463-29746019 (-)  GRCh38.p7

Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045165 Ensembl Gene Model | MGI Sequence Detail 2628 C57BL/6J ±  kb
transcript ENSMUST00000056288 Ensembl | MGI Sequence Detail 1932 Not Applicable  
polypeptide ENSMUSP00000063016 Ensembl | MGI Sequence Detail 225 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031499 Protein of unknown function DUF4689
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 2
References
more
  • Summaries
    All 43
    Diseases 3
    Gene Ontology 1
    Phenotypes 24
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:294217 Mitchell EJ, et al., Drug-responsive autism phenotypes in the 16p11.2 deletion mouse model: a central role for gene-environment interactions. Sci Rep. 2020 Jul 23;10(1):12303

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/22/2020
MGI 6.16
The Jackson Laboratory