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AI467606 Gene Detail
Summary
  • Symbol
    AI467606
  • Name
    expressed sequence AI467606
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141979
    NCBI Gene: 101602
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:127091359-127093986 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 69.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141979
protein coding gene Chr7:127090765-127094049 (.)
129S1/SvImJ MGP_129S1SvImJ_G0033020
protein coding gene Chr7:131410812-131413439 (+)
A/J MGP_AJ_G0033003
protein coding gene Chr7:127920980-127923608 (+)
AKR/J MGP_AKRJ_G0032935
protein coding gene Chr7:131164481-131167111 (+)
BALB/cJ MGP_BALBcJ_G0033008
protein coding gene Chr7:127583704-127586334 (+)
C3H/HeJ MGP_C3HHeJ_G0032718
protein coding gene Chr7:131097200-131099827 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033514
protein coding gene Chr7:136515983-136518610 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030486
protein coding gene Chr7:129128727-129131414 (+)
CAST/EiJ MGP_CASTEiJ_G0032047
protein coding gene Chr7:122891661-122894283 (+)
CBA/J MGP_CBAJ_G0032691
protein coding gene Chr7:141113522-141116149 (+)
DBA/2J MGP_DBA2J_G0032843
protein coding gene Chr7:125893679-125896306 (+)
FVB/NJ MGP_FVBNJ_G0032796
protein coding gene Chr7:125744692-125747319 (+)
LP/J MGP_LPJ_G0032937
protein coding gene Chr7:132880567-132883194 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032828
protein coding gene Chr7:142268843-142271472 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033533
protein coding gene Chr7:130171191-130173821 (+)
PWK/PhJ MGP_PWKPhJ_G0031754
protein coding gene Chr7:118891266-118893883 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031600
protein coding gene Chr7:117014839-117017478 (+)
WSB/EiJ MGP_WSBEiJ_G0032159
protein coding gene Chr7:131152621-131155249 (+)



Homology
more
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C16orf54, chromosome 16 open reading frame 54
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 283897
    neXtProt AC: NX_Q6UWD8
    UniProt: Q6UWD8

  • Chr Location
    16p11.2; chr16:29742463-29746019 (-)  GRCh38.p7

Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045165 Ensembl Gene Model | MGI Sequence Detail 2628 C57BL/6J ±  kb
transcript ENSMUST00000206102 Ensembl | MGI Sequence Detail 832 Not Applicable  
polypeptide ENSMUSP00000146315 Ensembl | MGI Sequence Detail 225 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031499 Protein of unknown function DUF4689
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 2
References
more
  • Summaries
    All 37
    Diseases 3
    Gene Ontology 1
    Phenotypes 18
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:263550 Wang W, et al., Chemogenetic Activation of Prefrontal Cortex Rescues Synaptic and Behavioral Deficits in a Mouse Model of 16p11.2 Deletion Syndrome. J Neurosci. 2018 Jun 27;38(26):5939-5948

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory