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Prrt4 Gene Detail
Summary
  • Symbol
    Prrt4
  • Name
    proline-rich transmembrane protein 4
  • Synonyms
    D330027H18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141677
    NCBI Gene: 101359
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:29169232-29179584 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 12.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    91 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141677
protein coding gene Chr6:29169230-29179584 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030515
protein coding gene Chr6:26935340-26947900 (-)
A/J MGP_AJ_G0030488
protein coding gene Chr6:25801649-25811117 (-)
AKR/J MGP_AKRJ_G0030415
protein coding gene Chr6:26650553-26660872 (-)
BALB/cJ MGP_BALBcJ_G0030498
protein coding gene Chr6:25959825-25969150 (-)
C3H/HeJ MGP_C3HHeJ_G0030211
protein coding gene Chr6:26654389-26664711 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030952
protein coding gene Chr6:27727318-27737654 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028163
protein coding gene Chr6:24010057-24019790 (-)
CAST/EiJ MGP_CASTEiJ_G0029613
protein coding gene Chr6:26437158-26447198 (-)
CBA/J MGP_CBAJ_G0030189
protein coding gene Chr6:28735518-28745872 (-)
DBA/2J MGP_DBA2J_G0030333
protein coding gene Chr6:25746634-25757423 (-)
FVB/NJ MGP_FVBNJ_G0030287
protein coding gene Chr6:25500234-25510891 (-)
LP/J MGP_LPJ_G0030420
protein coding gene Chr6:27079188-27089469 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030323
protein coding gene Chr6:31278159-31289521 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030982
protein coding gene Chr6:26517331-26527299 (-)
PWK/PhJ MGP_PWKPhJ_G0029327
protein coding gene Chr6:25280550-25290810 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029163
protein coding gene Chr6:26241775-26252136 (-)
WSB/EiJ MGP_WSBEiJ_G0029689
protein coding gene Chr6:26491655-26502632 (-)



Homology
more
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PRRT4, proline rich transmembrane protein 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 401399
    neXtProt AC: NX_C9JH25
    UniProt: C9JH25

  • Chr Location
    7q32.1; chr7:128350325-128362067 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079654 Ensembl Gene Model | MGI Sequence Detail 10353 C57BL/6J ±  kb
transcript ENSMUST00000159200 Ensembl | MGI Sequence Detail 3411 Not Applicable  
polypeptide ENSMUSP00000123751 Ensembl | MGI Sequence Detail 902 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory