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Nup205 Gene Detail
Summary
  • Symbol
    Nup205
  • Name
    nucleoporin 205
  • Synonyms
    3830404O05Rik, mKIAA0225
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141625
    NCBI Gene: 70699
  • Gene Overview
    MyGene.info: NUP205
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:35177616-35247599 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 15.24 cM, cytoband B1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    388 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141625
protein coding gene Chr6:35177421-35247599 (.)
129S1/SvImJ MGP_129S1SvImJ_G0030569
protein coding gene Chr6:33315317-33391366 (+)
A/J MGP_AJ_G0030542
protein coding gene Chr6:31872149-31942978 (+)
AKR/J MGP_AKRJ_G0030469
protein coding gene Chr6:32946420-33016253 (+)
BALB/cJ MGP_BALBcJ_G0030552
protein coding gene Chr6:32053674-32128834 (+)
C3H/HeJ MGP_C3HHeJ_G0030265
protein coding gene Chr6:32909759-32986535 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031006
protein coding gene Chr6:34139948-34213923 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028218
protein coding gene Chr6:29956050-30026785 (+)
CAST/EiJ MGP_CASTEiJ_G0029667
protein coding gene Chr6:32744541-32828646 (+)
CBA/J MGP_CBAJ_G0030243
protein coding gene Chr6:35470351-35560129 (+)
DBA/2J MGP_DBA2J_G0030387
protein coding gene Chr6:31748677-31818643 (+)
FVB/NJ MGP_FVBNJ_G0030341
protein coding gene Chr6:31545340-31617293 (+)
LP/J MGP_LPJ_G0030474
protein coding gene Chr6:33418915-33490952 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030377
protein coding gene Chr6:37771197-37851130 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031036
protein coding gene Chr6:32828598-32899704 (+)
PWK/PhJ MGP_PWKPhJ_G0029381
protein coding gene Chr6:31380241-31452204 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029217
protein coding gene Chr6:32511719-32585387 (+)
WSB/EiJ MGP_WSBEiJ_G0029743
protein coding gene Chr6:32772894-32846633 (+)



Homology
more
  • Human Ortholog
    NUP205, nucleoporin 205
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NUP205, nucleoporin 205
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C7orf14, NPHS13
  • Links
    NCBI Gene ID: 23165
    neXtProt AC: NX_Q92621
    UniProt: Q92621

  • Chr Location
    7q33; chr7:135557914-135648753 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 45971
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NUP205
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 70699 NCBI Gene Model | MGI Sequence Detail 69984 C57BL/6J ±  kb
transcript NM_027513 RefSeq | MGI Sequence Detail 6244 C57BL/6  
polypeptide NP_081789 RefSeq | MGI Sequence Detail 2008 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    11 Sequences
  • InterPro Domains
    IPR021827 Nucleoporin Nup186/Nup192/Nup205
Molecular
Reagents
less
  • All nucleic 17
    cDNA 17

    Microarray probesets 6
Other
Accession IDs
less
MGI:1917949
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:263646 Horiuchi K, et al., Impaired Spermatogenesis, Muscle, and Erythrocyte Function in U12 Intron Splicing-Defective Zrsr1 Mutant Mice. Cell Rep. 2018 Apr 3;23(1):143-155

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory