About   Help   FAQ
Clec2l Gene Detail
Summary
  • Symbol
    Clec2l
  • Name
    C-type lectin domain family 2, member L
  • Synonyms
    LOC381758
  • Feature Type
    protein coding gene
  • IDs
    MGI:2141402
    NCBI Gene: 665180
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:38663069-38680865 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 17.85 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    41 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2141402
protein coding gene Chr6:38663067-38680865 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030590
protein coding gene Chr6:36995659-37016131 (+)
A/J MGP_AJ_G0030563
protein coding gene Chr6:35378258-35397014 (+)
AKR/J MGP_AKRJ_G0030490
protein coding gene Chr6:36504642-36523360 (+)
BALB/cJ MGP_BALBcJ_G0030573
protein coding gene Chr6:35593194-35610786 (+)
C3H/HeJ MGP_C3HHeJ_G0030286
protein coding gene Chr6:36522487-36541355 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031027
protein coding gene Chr6:37914735-37934570 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028239
protein coding gene Chr6:33287917-33305311 (+)
CAST/EiJ MGP_CASTEiJ_G0029688
protein coding gene Chr6:36416525-36437493 (+)
CBA/J MGP_CBAJ_G0030264
protein coding gene Chr6:39402798-39422613 (+)
DBA/2J MGP_DBA2J_G0030408
protein coding gene Chr6:35197306-35214752 (+)
FVB/NJ MGP_FVBNJ_G0030362
protein coding gene Chr6:34989343-35006972 (+)
LP/J MGP_LPJ_G0030495
protein coding gene Chr6:37024935-37050253 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030398
protein coding gene Chr6:41777021-41801829 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031057
protein coding gene Chr6:36439829-36458613 (+)
PWK/PhJ MGP_PWKPhJ_G0029402
protein coding gene Chr6:34870700-34887838 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029238
protein coding gene Chr6:36165952-36183726 (+)
WSB/EiJ MGP_WSBEiJ_G0029764
protein coding gene Chr6:36384128-36403840 (+)



Homology
more
  • Human Ortholog
    CLEC2L, C-type lectin domain family 2 member L
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CLEC2L, C-type lectin domain family 2 member L
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 154790
    neXtProt AC: NX_P0C7M8
    UniProt: P0C7M8

  • Chr Location
    7q34; chr7:139523928-139544985 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 665180 NCBI Gene Model | MGI Sequence Detail 17797 C57BL/6J ±  kb
transcript NM_001101507 RefSeq | MGI Sequence Detail 1445 C57BL/6  
polypeptide P0C7M9 UniProt | EBI | MGI Sequence Detail 211 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
    IPR033992 Natural killer cell receptor-like, C-type lectin-like domain
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141649, MGI:2685910, MGI:3779749
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Gene Ontology 1
  • Earliest
    J:275806 Wu D, et al., A Role for Sensory end Organ-Derived Signals in Regulating Muscle Spindle Proprioceptor Phenotype. J Neurosci. 2019 May 29;39(22):4252-4267

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/23/2020
MGI 6.15
The Jackson Laboratory