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Zfp513
Gene Detail
Symbol

Name
ID
Zfp513
zinc finger protein 513
MGI:2141255
Synonyms
D430028M17Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 5
17.27 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:31198981-31202303 bp, - strand
From VEGA annotation of GRCm38

  3323 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16955  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: ZNF513
Gene Tree: Zfp513

Human
homologs
ZNF513, zinc finger protein 513
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 130557
neXtProt AC: NX_Q8N8E2

Human Synonyms: HMFT0656, RP58

Human Chr (Location): 2p23.3; chr2:27377231-27380866 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human ZNF513

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(6) Radiation induced(3) Targeted(2)
Genomic Mutations involving Zfp513 (3)
Mutations Annotated to Human Diseases (1)    Phenotype Images(4)
Interactions
Zfp513 interacts with 82 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process regulation of transcription, DNA-templated, retina development in camera-type eye, ...
Component nucleus
Function DNA binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (32)    Tissues (23)    Images (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 24
RT-PCR 8
cDNA source data(31)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: ZFIN znf513    NEW 
Molecular
reagents
All nucleic(32) cDNA(31) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000022493 (Evidence)
Ensembl Gene Model ENSMUSG00000043059 (Evidence)
Entrez Gene 101023 (Evidence)
UniGene 45033
DFCI TC1578128, TC1587541, TC1674782
DoTS DT.110706091, DT.110706106, DT.110706150, DT.530649, DT.55281354, DT.94230356
NIA Mouse Gene Index U026063
Consensus CDS Project CCDS19178.2, CCDS51458.1
International Mouse Phenotyping Consortium Status Zfp513
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022493 VEGA Gene Model | MGI Sequence Detail 3323 C57BL/6J ±  kb
transcript OTTMUST00000053847 VEGA | MGI Sequence Detail 2228 Not Applicable 
polypeptide OTTMUSP00000025625 VEGA | MGI Sequence Detail 541 Not Applicable 

For the selected sequences
All sequences(62) RefSeq(6) UniProt(4)
Polymorphisms
SNPs within 2kb(20 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007087 Zinc finger, C2H2
InterPro IPR015880 Zinc finger, C2H2-like
InterPro IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Protein Ontology PR:000017946 zinc finger protein 513
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(35)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory