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Nsun5 Gene Detail
Summary
  • Symbol
    Nsun5
  • Name
    NOL1/NOP2/Sun domain family, member 5
  • Synonyms
    9830109N13Rik, Nol1r, Wbscr20a
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140844
    NCBI Gene: 100609
  • Gene Overview
    MyGene.info: NSUN5
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:135369953-135376805 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 75.16 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140844
protein coding gene Chr5:135369930-135376805 (.)
129S1/SvImJ MGP_129S1SvImJ_G0030181
protein coding gene Chr5:139892184-139900358 (+)
A/J MGP_AJ_G0030149
protein coding gene Chr5:133905058-133911910 (+)
AKR/J MGP_AKRJ_G0030082
protein coding gene Chr5:138257613-138264465 (+)
BALB/cJ MGP_BALBcJ_G0030159
protein coding gene Chr5:135259988-135266832 (+)
C3H/HeJ MGP_C3HHeJ_G0029875
protein coding gene Chr5:138824521-138831412 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030612
protein coding gene Chr5:145116537-145123414 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027835
protein coding gene Chr5:128203096-128209870 (+)
CAST/EiJ MGP_CASTEiJ_G0029284
protein coding gene Chr5:138233208-138240746 (+)
CBA/J MGP_CBAJ_G0029845
protein coding gene Chr5:150810292-150817143 (+)
DBA/2J MGP_DBA2J_G0029996
protein coding gene Chr5:133815007-133821859 (+)
FVB/NJ MGP_FVBNJ_G0029951
protein coding gene Chr5:132942351-132949219 (+)
LP/J MGP_LPJ_G0030084
protein coding gene Chr5:140347554-140354393 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029983
protein coding gene Chr5:153804842-153813000 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030652
protein coding gene Chr5:138001584-138009297 (+)
PWK/PhJ MGP_PWKPhJ_G0028999
protein coding gene Chr5:132848711-132855503 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028834
protein coding gene Chr5:135564631-135572260 (+)
WSB/EiJ MGP_WSBEiJ_G0029358
protein coding gene Chr5:138755796-138764102 (+)



Homology
more
  • Human Ortholog
    NSUN5, NOP2/Sun RNA methyltransferase family member 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    NSUN5, NOP2/Sun RNA methyltransferase family member 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    NOL1, NOL1R, NSUN5A, p120, p120(NOL1), WBSCR20, WBSCR20A
  • Links
    NCBI Gene ID: 55695
    neXtProt AC: NX_Q96P11
    UniProt: Q96P11

  • Chr Location
    7q11.23; chr7:73302516-73308867 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 6828
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: NSUN5
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000000916 Ensembl Gene Model | MGI Sequence Detail 6853 C57BL/6J ±  kb
transcript ENSMUST00000000940 Ensembl | MGI Sequence Detail 2243 Not Applicable  
polypeptide ENSMUSP00000000940 Ensembl | MGI Sequence Detail 465 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    Genomic 2
    cDNA 9
    Primer pair 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2157794
References
more
  • Summaries
    All 35
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:73830 DeSilva U, et al., Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome. Genome Res. 2002 Jan;12(1):3-15
  • Latest
    J:203014 Chi L, et al., Expression of NOL1/NOP2/sun domain (Nsun) RNA methyltransferase family genes in early mouse embryogenesis. Gene Expr Patterns. 2013 Dec;13(8):319-27

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory