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Zfp518b Gene Detail
Summary
  • Symbol
    Zfp518b
  • Name
    zinc finger protein 518B
  • Synonyms
    6820424L24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140750
    NCBI Gene: 100515
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:38668484-38684826 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 20.77 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140750
protein coding gene Chr5:38668484-38684826 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029514
protein coding gene Chr5:37095486-37114115 (-)
A/J MGP_AJ_G0029480
protein coding gene Chr5:35845175-35861444 (-)
AKR/J MGP_AKRJ_G0029430
protein coding gene Chr5:37190036-37208083 (-)
BALB/cJ MGP_BALBcJ_G0029491
protein coding gene Chr5:36335479-36351784 (-)
C3H/HeJ MGP_C3HHeJ_G0029214
protein coding gene Chr5:37181101-37197426 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029945
protein coding gene Chr5:39051146-39067463 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027183
protein coding gene Chr5:33510009-33527080 (-)
CAST/EiJ MGP_CASTEiJ_G0028622
protein coding gene Chr5:36359601-36376534 (-)
CBA/J MGP_CBAJ_G0029181
protein coding gene Chr5:39972188-39988485 (-)
DBA/2J MGP_DBA2J_G0029328
protein coding gene Chr5:35974041-35990351 (-)
FVB/NJ MGP_FVBNJ_G0029287
protein coding gene Chr5:35469146-35485697 (-)
LP/J MGP_LPJ_G0029414
protein coding gene Chr5:37550886-37568240 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029317
protein coding gene Chr5:40693608-40710839 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029978
protein coding gene Chr5:36688124-36704460 (-)
PWK/PhJ MGP_PWKPhJ_G0028346
protein coding gene Chr5:35145755-35162047 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028180
protein coding gene Chr5:36138780-36157241 (-)
WSB/EiJ MGP_WSBEiJ_G0028703
protein coding gene Chr5:36770081-36789178 (-)



Homology
more
  • Human Ortholog
    ZNF518B, zinc finger protein 518B
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ZNF518B, zinc finger protein 518B
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 85460
    neXtProt AC: NX_Q9C0D4
    UniProt: Q9C0D4

  • Chr Location
    4p16.1; chr4:10439880-10457427 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
  • All Mutations and Alleles
    23
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Gene trapped
    16
  • Radiation induced
    2
  • Spontaneous
    1
  • Targeted
    1
  • Genomic Mutations
    6 involving Zfp518b
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100515 NCBI Gene Model | MGI Sequence Detail 16343 C57BL/6J ±  kb
transcript NM_001081144 RefSeq | MGI Sequence Detail 6882 C57BL/6  
polypeptide B2RRE4 UniProt | EBI | MGI Sequence Detail 1077 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 77
    cDNA 77

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140953
References
more
  • Summaries
    All 47
    Diseases 1
    Gene Ontology 3
    Phenotypes 25
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory