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C87977 Gene Detail
Summary
  • Symbol
    C87977
  • Name
    expressed sequence C87977
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140708
    NCBI Gene: 97187
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:144206762-144213017 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    112 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140708
protein coding gene Chr4:144206762-144213318 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029076
protein coding gene Chr4:147069700-147081476 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0019930
protein coding gene Chr12:86165449-86177481 (-)
C3H/HeJ MGP_C3HHeJ_G0028782
protein coding gene Chr4:145606951-145613257 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029513
protein coding gene Chr4:152497990-152503221 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026766
protein coding gene Chr4:133717965-133724428 (+)
CAST/EiJ MGP_CASTEiJ_G0028203
protein coding gene Chr4:143777008-143782334 (-)
CBA/J MGP_CBAJ_G0028744
protein coding gene Chr4:157178035-157214583 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0028991
protein coding gene Chr4:147585102-147591360 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029546
protein coding gene Chr4:145692992-145703260 (-)
PWK/PhJ MGP_PWKPhJ_G0015131
protein coding gene Chr1:42670729-42671704 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014913
protein coding gene Chr1:44444680-44445653 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 97187 NCBI Gene Model | MGI Sequence Detail 6256 C57BL/6J ±  kb
transcript NM_001177542 RefSeq | MGI Sequence Detail 1826 C57BL/6  
polypeptide NP_001171013 RefSeq | MGI Sequence Detail 498 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    6 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:2140699
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory