About   Help   FAQ
C87499 Gene Detail
Summary
  • Symbol
    C87499
  • Name
    expressed sequence C87499
  • Synonyms
    MGC:60825
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140706
    NCBI Gene: 381590
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:88627320-88634186 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 42.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140706
protein coding gene Chr4:88627320-88634411 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028426
protein coding gene Chr4:88493537-88500583 (-)
A/J MGP_AJ_G0028387
protein coding gene Chr4:85410158-85417031 (-)
AKR/J MGP_AKRJ_G0028336
protein coding gene Chr4:87520409-87527242 (-)
BALB/cJ MGP_BALBcJ_G0028407
protein coding gene Chr4:85619288-85628155 (-)
C3H/HeJ MGP_C3HHeJ_G0028120
protein coding gene Chr4:88242659-88251585 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028846
protein coding gene Chr4:91893532-91900377 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026145
protein coding gene Chr4:81403475-81409996 (-)
CAST/EiJ MGP_CASTEiJ_G0027562
protein coding gene Chr4:86081138-86088060 (-)
CBA/J MGP_CBAJ_G0028091
protein coding gene Chr4:94708660-94715713 (-)
DBA/2J MGP_DBA2J_G0028240
protein coding gene Chr4:85174207-85181106 (-)
FVB/NJ MGP_FVBNJ_G0028205
protein coding gene Chr4:84123220-84130092 (-)
LP/J MGP_LPJ_G0028340
protein coding gene Chr4:88854046-88860963 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028235
protein coding gene Chr4:99720032-99727102 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028883
protein coding gene Chr4:87661601-87668617 (-)
PWK/PhJ MGP_PWKPhJ_G0027285
protein coding gene Chr4:83491106-83499419 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027108
protein coding gene Chr4:85186071-85192471 (-)
WSB/EiJ MGP_WSBEiJ_G0027639
protein coding gene Chr4:87867973-87876128 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381590 NCBI Gene Model | MGI Sequence Detail 6867 C57BL/6J ±  kb
transcript NM_198663 RefSeq | MGI Sequence Detail 1828 C57BL/6  
polypeptide NP_941065 RefSeq | MGI Sequence Detail 493 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    7 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
Molecular
Reagents
less
  • All nucleic 47
    Genomic 1
    cDNA 46

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/08/2019
MGI 6.14
The Jackson Laboratory