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Slc44a1 Gene Detail
Summary
  • Symbol
    Slc44a1
  • Name
    solute carrier family 44, member 1
  • Synonyms
    2210409B22Rik, 4833416H08Rik, Cdw92, CHTL1, CTL1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140592
    NCBI Gene: 100434
  • Gene Overview
    MyGene.info: SLC44A1
Location & Maps
more
  • Sequence Map
    Chr4:53440413-53622478 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      182066 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 28.66 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SLC44A1, solute carrier family 44 member 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SLC44A1, solute carrier family 44 member 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CD92, CDW92, CHTL1, CTL1
  • Links
    NCBI Gene ID: 23446
    neXtProt AC: NX_Q8WWI5

  • Chr Location
    9q31.2; chr9:105244608-105438504 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007068 VEGA Gene Model | MGI Sequence Detail 182066 C57BL/6J ±  kb
transcript OTTMUST00000016357 VEGA | MGI Sequence Detail 2176 Not Applicable  
polypeptide OTTMUSP00000007477 VEGA | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1335 from dbSNP Build 142
Protein
Information
less
  • UniProt
    6 Sequences
  • Protein Ontology
    PR:000001334 choline transporter-like protein 1
  • InterPro Domains
    IPR007603 Choline transporter-like
Molecular
Reagents
less
  • All nucleic 14
    cDNA 13
    Primer pair 1

    Microarray probesets 11
Other
Accession IDs
less
MGI:1917424, MGI:1921010
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:8500 Van der Bliek AM, et al., Overexpression and amplification of five genes in a multidrug-resistant Chinese hamster ovary cell line. Mol Cell Biol. 1986 May;6(5):1671-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory