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AW011738 Gene Detail
Summary
  • Symbol
    AW011738
  • Name
    expressed sequence AW011738
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2140540
    NCBI Gene: 100382
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:156203284-156206028 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 88.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140540
lncRNA gene Chr4:156203270-156210563 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029249
protein coding gene Chr4:160572912-160574767 (+)
A/J MGP_AJ_G0029214
protein coding gene Chr4:153808182-153810031 (+)
AKR/J MGP_AKRJ_G0029162
protein coding gene Chr4:157997808-157999657 (+)
BALB/cJ MGP_BALBcJ_G0029230
protein coding gene Chr4:154284295-154286017 (+)
C3H/HeJ MGP_C3HHeJ_G0028951
protein coding gene Chr4:158572230-158574079 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029679
protein coding gene Chr4:166274957-166276804 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0028363
protein coding gene Chr4:155990959-155992799 (+)
CBA/J MGP_CBAJ_G0028913
protein coding gene Chr4:171318878-171320726 (+)
DBA/2J MGP_DBA2J_G0029062
protein coding gene Chr4:153827887-153829736 (+)
FVB/NJ MGP_FVBNJ_G0029025
protein coding gene Chr4:153077467-153079314 (+)
LP/J MGP_LPJ_G0029152
protein coding gene Chr4:160522334-160524184 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029052
protein coding gene Chr4:174091245-174093092 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029711
protein coding gene Chr4:158633895-158635744 (+)
PWK/PhJ MGP_PWKPhJ_G0028083
protein coding gene Chr4:149970818-149972668 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0028443
protein coding gene Chr4:158812325-158814169 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100382 NCBI Gene Model | MGI Sequence Detail 2745 C57BL/6J ±  kb
transcript NR_030671 RefSeq | MGI Sequence Detail 2745 C57BL/6  
polypeptide Q3U0L7 UniProt | EBI | MGI Sequence Detail 162 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 3
References
more
  • Summaries
    All 13
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory