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AU022252 Gene Detail
Summary
  • Symbol
    AU022252
  • Name
    expressed sequence AU022252
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140466
    NCBI Gene: 230696
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119077039-119089884 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 55.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    558 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140466
 protein coding gene Chr4:119060767-119089909 (-)
129S1/SvImJ ENSMUSG00200012078
 protein coding gene Chr4:112981487-112994494 (-)
A/J ENSMUSG00195028826
 protein coding gene Chr4:114227597-114240527 (-)
AKR/J ENSMUSG00220019177
 protein coding gene Chr4:113588620-113601733 (-)
BALB/cJ ENSMUSG00180038263
 protein coding gene Chr4:112289287-112303843 (-)
C3H/HeJ ENSMUSG00175021834
 protein coding gene Chr4:113302480-113317034 (-)
C57BL/6NJ ENSMUSG00215029954
 protein coding gene Chr4:114414996-114428033 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026392
 protein coding gene Chr4:109758290-109787928 (-)
CAST/EiJ no annotation
CBA/J ENSMUSG00210051945
 protein coding gene Chr4:112908976-112923532 (-)
DBA/2J ENSMUSG00185044117
 protein coding gene Chr4:114462598-114475526 (-)
FVB/NJ ENSMUSG00205019631
 protein coding gene Chr4:112384893-112399450 (-)
JF1/MsJ ENSUMUG00000007094
 protein coding gene Chr4:114369705-114382710 (-)
LP/J ENSMUSG00230041368
 protein coding gene Chr4:117799262-117812268 (-)
NOD/ShiLtJ ENSMUSG00190028944
 protein coding gene Chr4:112291592-112306152 (-)
NZO/HlLtJ ENSMUSG00225014807
 protein coding gene Chr4:123345919-123358945 (-)
PWK/PhJ ENSLUMG00010037341
 protein coding gene Chr4:111787822-111800622 (-)
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005036551
 protein coding gene Chr4:112602476-112615582 (-)



Homology
more
  • Human Ortholog
    C1orf50, chromosome 1 open reading frame 50
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C1orf50, chromosome 1 open reading frame 50
  • Links
    NCBI Gene ID: 79078
    UniProt: Q9BV19

  • Chr Location
    1p34.2; chr1:42767245-42779491 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving AU022252
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    4 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 230696 NCBI Gene Model | MGI Sequence Detail 12846 C57BL/6J ±  kb
transcript NM_001012400 RefSeq | MGI Sequence Detail 7126 C57BL/6  
polypeptide Q5EBG8 UniProt | EBI | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 6
Other
Accession IDs
less
MGI:2140290, MGI:3779441
References
more
  • Summaries
    All 31
    Gene Ontology 2
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory