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AU022252 Gene Detail
Summary
  • Symbol
    AU022252
  • Name
    expressed sequence AU022252
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140466
    NCBI Gene: 230696
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119221359-119232789 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 55.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140466
protein coding gene Chr4:119203570-119232789 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028691
protein coding gene Chr4:120387704-120416764 (-)
A/J MGP_AJ_G0028651
protein coding gene Chr4:115656995-115686209 (-)
AKR/J MGP_AKRJ_G0028604
protein coding gene Chr4:118167428-118196471 (-)
BALB/cJ MGP_BALBcJ_G0028674
protein coding gene Chr4:116272766-116303677 (-)
C3H/HeJ MGP_C3HHeJ_G0028389
protein coding gene Chr4:119732931-119762403 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029115
protein coding gene Chr4:124957633-124986755 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026392
protein coding gene Chr4:109758290-109787928 (-)
CAST/EiJ MGP_CASTEiJ_G0027820
protein coding gene Chr4:117054835-117084364 (-)
CBA/J MGP_CBAJ_G0028356
protein coding gene Chr4:128337167-128373308 (-)
DBA/2J MGP_DBA2J_G0028503
protein coding gene Chr4:116248586-116278232 (-)
FVB/NJ MGP_FVBNJ_G0028469
protein coding gene Chr4:114761839-114791596 (-)
LP/J MGP_LPJ_G0028603
protein coding gene Chr4:120492955-120534414 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028497
protein coding gene Chr4:133203768-133237478 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029152
protein coding gene Chr4:119240849-119271124 (-)
PWK/PhJ MGP_PWKPhJ_G0027543
protein coding gene Chr4:113169908-113199521 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027369
protein coding gene Chr4:115664145-115693353 (-)
WSB/EiJ MGP_WSBEiJ_G0027900
protein coding gene Chr4:119242320-119274012 (-)



Homology
more
  • Human Ortholog
    C1orf50, chromosome 1 open reading frame 50
  • Vertebrate Orthologs
    10
  • Human Ortholog
    C1orf50, chromosome 1 open reading frame 50
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 79078
    neXtProt AC: NX_Q9BV19
    UniProt: Q9BV19

  • Chr Location
    1p34.2; chr1:42767245-42775742 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    4
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving AU022252
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 230696 NCBI Gene Model | MGI Sequence Detail 11431 C57BL/6J ±  kb
transcript NM_001012400 RefSeq | MGI Sequence Detail 1867 C57BL/6  
polypeptide Q5EBG8 UniProt | EBI | MGI Sequence Detail 199 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR019534 Protein of unknown function DUF2452
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 6
Other
Accession IDs
less
MGI:2140290, MGI:3779441
References
more
  • Summaries
    All 28
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-Le-Grand). 1999 Jul;45(5):737-50
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory