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Calr4 Gene Detail
Summary
  • Symbol
    Calr4
  • Name
    calreticulin 4
  • Synonyms
    4933403L16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140435
    NCBI Gene: 108802
Location & Maps
more
  • Sequence Map
    Chr4:109234485-109254571 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20087 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 51.10 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CALR4P, calreticulin 4, pseudogene
  • Vertebrate Orthologs
    3
  • Human Ortholog
    CALR4P, calreticulin 4, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 441884

  • Chr Location
    1p32.3; chr1:51554728-51569750 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Calr4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000008291 VEGA Gene Model | MGI Sequence Detail 20087 C57BL/6J ±  kb
transcript OTTMUST00000018859 VEGA | MGI Sequence Detail 1606 Not Applicable  
polypeptide OTTMUSP00000008659 VEGA | MGI Sequence Detail 420 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    345 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR009169 Calreticulin
    IPR001580 Calreticulin/calnexin
    IPR018124 Calreticulin/calnexin, conserved site
    IPR009033 Calreticulin/calnexin, P domain
    IPR013320 Concanavalin A-like lectin/glucanase domain
Molecular
Reagents
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  • All nucleic 12
    cDNA 12

    Microarray probesets 3
Other
Accession IDs
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MGI:1918281
References
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  • Summaries
    All 23
    Phenotypes 9
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory