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AI507597 Gene Detail
Summary
  • Symbol
    AI507597
  • Name
    expressed sequence AI507597
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2140323
    NCBI Gene: 100165
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:141614370-141615604 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 74.64 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    61 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140323
lncRNA gene Chr4:141614026-141615604 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003988
antisense lncRNA gene Chr4:144695618-144697192 (+)
A/J MGP_AJ_G0003969
antisense lncRNA gene Chr4:138388432-138390010 (+)
AKR/J MGP_AKRJ_G0003946
antisense lncRNA gene Chr4:142405901-142407477 (+)
BALB/cJ MGP_BALBcJ_G0003955
antisense lncRNA gene Chr4:139082982-139084558 (+)
C3H/HeJ MGP_C3HHeJ_G0003902
antisense lncRNA gene Chr4:142773577-142775153 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004103
antisense lncRNA gene Chr4:149732090-149733668 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003587
antisense lncRNA gene Chr4:131301541-131303117 (+)
CAST/EiJ MGP_CASTEiJ_G0003865
antisense lncRNA gene Chr4:141045815-141047390 (+)
CBA/J MGP_CBAJ_G0003895
antisense lncRNA gene Chr4:154128509-154130085 (+)
DBA/2J MGP_DBA2J_G0003911
antisense lncRNA gene Chr4:138785901-138787479 (+)
FVB/NJ MGP_FVBNJ_G0003930
antisense lncRNA gene Chr4:137904933-137906511 (+)
LP/J MGP_LPJ_G0003991
antisense lncRNA gene Chr4:144717863-144719437 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003918
antisense lncRNA gene Chr4:157888798-157890375 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004098
antisense lncRNA gene Chr4:142924950-142926528 (+)
PWK/PhJ MGP_PWKPhJ_G0003819
antisense lncRNA gene Chr4:135677288-135678866 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003765
antisense lncRNA gene Chr4:138734483-138736063 (+)
WSB/EiJ MGP_WSBEiJ_G0003901
antisense lncRNA gene Chr4:143203988-143205562 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    3 involving AI507597
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 100165 NCBI Gene Model | MGI Sequence Detail 1235 C57BL/6J ±  kb
transcript NR_033566 RefSeq | MGI Sequence Detail 864 C57BL/6  
polypeptide Q3V2J3 UniProt | EBI | MGI Sequence Detail 68 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 14
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/12/2019
MGI 6.14
The Jackson Laboratory