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Zbtb48 Gene Detail
Summary
  • Symbol
    Zbtb48
  • Name
    zinc finger and BTB domain containing 48
  • Synonyms
    0610011D15Rik, Hkr3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140248
    NCBI Gene: 100090
  • Gene Overview
    MyGene.info: ZBTB48
Location & Maps
more
  • Sequence Map
    Chr4:152019774-152027671 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7898 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 82.83 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ZBTB48, zinc finger and BTB domain containing 48
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZBTB48, zinc finger and BTB domain containing 48
    Orthology source: HGNC, HomoloGene
  • Synonyms
    HKR3, pp9964, ZNF855
  • Links
    NCBI Gene ID: 3104
    neXtProt AC: NX_P10074

  • Chr Location
    1p36.3; chr1:6579991-6589280 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 3905
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: ZBTB48
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    7
  • Gene trapped
    3
  • Targeted
    4
  • Genomic Mutations
    3 involving Zbtb48
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010373 VEGA Gene Model | MGI Sequence Detail 7898 C57BL/6J ±  kb
transcript OTTMUST00000064122 VEGA | MGI Sequence Detail 2218 Not Applicable  
polypeptide OTTMUSP00000031803 VEGA | MGI Sequence Detail 681 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    113 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:140465 Guo G, et al., Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. Dev Cell. 2010 Apr 20;18(4):675-85

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory