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Camta1
Gene Detail
Symbol

Name
ID
Camta1
calmodulin binding transcription activator 1
MGI:2140230
Synonyms
1810059M14Rik, 2310058O09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
81.53 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:151059525-151861876 bp, - strand
From VEGA annotation of GRCm38

  802352 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18942  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CAMTA1
Gene Tree: Camta1

Human
homologs
CAMTA1, calmodulin binding transcription activator 1
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 23261
neXtProt AC: NX_Q9Y6Y1

Human Synonyms: CANPMR

Human Chr (Location): 1p36.31-p36.23; chr1:6785324-7769706 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human CAMTA1

Mutations,
alleles, and
phenotypes
All mutations/alleles(36) : Gene trapped(30) Targeted(6)
Genomic Mutations involving Camta1 (3)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Camta1 interacts with 496 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process neuromuscular process controlling balance, regulation of transcription, DNA-templated, ...
Component cytoplasm, nucleus
Function DNA binding, sequence-specific DNA binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (180)    Tissues (156)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 173
RT-PCR 7
cDNA source data(22)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase camta1 ; ZFIN camta1b    NEW 
Molecular
reagents
All nucleic(27) Genomic(1) cDNA(22) Primer pair(4)
Microarray probesets(12)
Other database
links
VEGA Gene Model OTTMUSG00000010309 (Evidence)
Ensembl Gene Model ENSMUSG00000014592 (Evidence)
Entrez Gene 100072 (Evidence)
DFCI TC1779396, TC1618976, TC1671513, TC1609601, TC1604760, TC1652256, TC1644953, TC1619765, TC1644339
DoTS DT.91283407, DT.110823785, DT.55196309, DT.50314893, DT.101160436, DT.55151117, DT.101133779, DT.91426221, DT.94264428
NIA Mouse Gene Index U025827, U059502
Consensus CDS Project CCDS38981.1, CCDS57315.1
International Mouse Phenotyping Consortium Status Camta1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010309 VEGA Gene Model | MGI Sequence Detail 802352 C57BL/6J ±  kb
transcript OTTMUST00000024009 VEGA | MGI Sequence Detail 8423 Not Applicable 
polypeptide OTTMUSP00000011013 VEGA | MGI Sequence Detail 1682 Not Applicable 

For the selected sequences
All sequences(105) RefSeq(11) UniProt(6)
Polymorphisms
SNPs within 2kb(6844 from dbSNP Build 137)    SNPs within 2kb including multiple locations(6846)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR002909 Cell surface receptor IPT/TIG
InterPro IPR005559 CG-1 DNA-binding domain
InterPro IPR014756 Immunoglobulin E-set
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR000048 IQ motif, EF-hand binding site
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
Protein Ontology PR:000005000 calmodulin-binding transcription activator 1
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:212232 Long C, et al., Ataxia and Purkinje cell degeneration in mice lacking the CAMTA1 transcription factor. Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11521-6
All references(40)
Other
accession IDs
MGI:1922837, MGI:1922929, MGI:2140626

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory