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Camta1
Gene Detail
Symbol

Name
ID
Camta1
calmodulin binding transcription activator 1
MGI:2140230
Synonyms
1810059M14Rik, 2310058O09Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 4
81.53 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:151059525-151861876 bp, - strand
From VEGA annotation of GRCm38

  802352 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18942  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Camta1

Human
homologs
Human Homolog CAMTA1, calmodulin binding transcription activator 1
NCBI Gene ID 23261
neXtProt AC  NX_Q9Y6Y1
Human Synonyms  CANPMR
Human Chr (Location)  1p36.31-p36.23; chr1:6785324-7769706 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human CAMTA1
Mutations,
alleles, and
phenotypes
All mutations/alleles(33) : Gene trapped(30) Targeted(3)
Genomic Mutations involving Camta1 (2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Camta1 interacts with 496 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process regulation of transcription, DNA-templated, transcription, DNA-templated
Component cytoplasm, nucleus
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (180)    Tissues (156)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 173
RT-PCR 7
cDNA source data(22)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) Genomic(1) cDNA(22) Primer pair(4)
Microarray probesets(12)
Other database
links
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010309 VEGA Gene Model | MGI Sequence Detail 802352 C57BL/6J ±  kb
transcript OTTMUST00000024009 VEGA | MGI Sequence Detail 8423 Not Applicable 
polypeptide OTTMUSP00000011013 VEGA | MGI Sequence Detail 1682 Not Applicable 

For the selected sequences
All sequences(132) RefSeq(39) UniProt(6)
Polymorphisms
SNPs within 2kb(6844 from dbSNP Build 137)    SNPs within 2kb including multiple locations(6846)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR002909 Cell surface receptor IPT/TIG
InterPro IPR005559 CG-1 DNA-binding domain
InterPro IPR014756 Immunoglobulin E-set
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR000048 IQ motif, EF-hand binding site
InterPro IPR027417 P-loop containing nucleoside triphosphate hydrolase
Protein Ontology PR:000005000 calmodulin-binding transcription activator 1
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:181631 Gehman LT, et al., The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function. Genes Dev. 2012 Mar 1;26(5):445-60
All references(40)
Other
accession IDs
MGI:1922837, MGI:1922929, MGI:2140626

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory