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Camta1
Gene Detail
 Symbol
Name
ID
Camta1
calmodulin binding transcription activator 1
MGI:2140230
Synonyms 1810059M14Rik, 2310058O09Rik
Feature Type protein coding gene
Genetic Map
Chromosome 4
81.53 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:151059525-151861876 bp, - strand
From VEGA annotation of GRCm38

  802352 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18942  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Camta1

Human
homologs
Human Homolog CAMTA1, calmodulin binding transcription activator 1
NCBI Gene ID 23261
neXtProt AC  NX_Q9Y6Y1
Human Synonyms  CANPMR
Human Chr (Location)  1p36.31-p36.23; chr1:6785324-7769706 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human CAMTA1
Alleles
and
phenotypes
All alleles(31) : Gene trapped(30) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process regulation of transcription, DNA-templated, transcription, DNA-templated
Component cytoplasm, nucleus
Function DNA binding
External Resources: FuncBase
Expression
Literature Summary: (5 records)
Data Summary: Results (182)    Tissues (158)    Images (22)
Theiler Stages: 1, 2, 3, 5, 19, 22, 23, 28
Assay TypeResults
RNA in situ 173
RT-PCR 9
cDNA source data(22)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(27) Genomic(1) cDNA(22) Primer pair(4)
Microarray probesets(12)
Other database
links
VEGA Gene ModelOTTMUSG00000010309 (Evidence)
Ensembl Gene ModelENSMUSG00000014592 (Evidence)
Entrez Gene100072 (Evidence)
DFCITC1604760, TC1609601, TC1618976, TC1619765, TC1644339, TC1644953, TC1652256, TC1671513, TC1779396
DoTSDT.101133779, DT.101160436, DT.110823785, DT.50314893, DT.55151117, DT.55196309, DT.91283407, DT.91426221, DT.94264428
NIA Mouse Gene IndexU025827, U059502
Consensus CDS ProjectCCDS38981.1, CCDS57315.1
International Mouse Knockout Project StatusCamta1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010309 VEGA Gene Model | MGI Sequence Detail 802352 C57BL/6J ±  kb
transcript OTTMUST00000024009 VEGA | MGI Sequence Detail 8423 Not Applicable 
polypeptide OTTMUSP00000011013 VEGA | MGI Sequence Detail 1682 Not Applicable 

For the selected sequences
All sequences(132) RefSeq(39) UniProt(6)
Polymorphisms SNPs within 2kb(6844 from dbSNP Build 137)    SNPs within 2kb including multiple locations(6846)
Protein-related
information
ResourceIDDescription
InterPro IPR002110 Ankyrin repeat
InterPro IPR020683 Ankyrin repeat-containing domain
InterPro IPR002909 Cell surface receptor IPT/TIG
InterPro IPR005559 CG-1 DNA-binding domain
InterPro IPR014756 Immunoglobulin E-set
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR000048 IQ motif, EF-hand binding site
Protein Ontology PR:000005000 calmodulin-binding transcription activator 1
References (Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:181631 Gehman LT, et al., The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function. Genes Dev. 2012 Mar 1;26(5):445-60
All references(40)
Other
accession IDs
MGI:1922837, MGI:1922929, MGI:2140626

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory