About   Help   FAQ
Cyp2j11
Gene Detail
Symbol

Name
ID
Cyp2j11
cytochrome P450, family 2, subfamily j, polypeptide 11
MGI:2140224
Synonyms
Cyp2j11-ps
Feature Type
protein coding gene
Genetic Map
Chromosome 4
44.44 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr4:96294508-96348662 bp, - strand
From VEGA annotation of GRCm38

  54155 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:133819  Vertebrate Homology Class
2 mouse; 1 rat

Protein SuperFamily: cytochrome P450 CYP2D6
Gene Tree: Cyp2j11

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp2j11 interacts with 75 markers (Mir1a-1, Mir1a-2, Mir16-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(22)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(22) cDNA(22)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000007865 (Evidence)
Ensembl Gene ModelENSMUSG00000066097 (Evidence)
Entrez Gene100066 (Evidence)
UniGene26915
DFCITC1584366
DoTSDT.91574182
NIA Mouse Gene IndexU025276
Consensus CDS ProjectCCDS38814.1
International Mouse Knockout Project StatusCyp2j11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007865 VEGA Gene Model | MGI Sequence Detail 54155 C57BL/6J ±  kb
transcript OTTMUST00000017895 VEGA | MGI Sequence Detail 1917 Not Applicable 
polypeptide OTTMUSP00000051045 VEGA | MGI Sequence Detail 504 Not Applicable 

For the selected sequences
All sequences(22) RefSeq(4) UniProt(4)
Polymorphisms
SNPs within 2kb(178 from dbSNP Build 137)    SNPs within 2kb including multiple locations(180)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
InterPro IPR008071 Cytochrome P450, E-class, group I, CYP2J-like
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/16/2014
MGI 5.20
The Jackson Laboratory