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Ecpas Gene Detail
Summary
  • Symbol
    Ecpas
  • Name
    Ecm29 proteasome adaptor and scaffold
  • Synonyms
    AI314180, mKIAA0368
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140220
    NCBI Gene: 230249
  • Gene Overview
    MyGene.info: ECPAS
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:58798911-58912749 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 32.35 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    765 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140220
 protein coding gene Chr4:58797234-58913110 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028327
 protein coding gene Chr4:57664937-57784415 (-)
A/J MGP_AJ_G0028288
 protein coding gene Chr4:55442104-55561647 (-)
AKR/J MGP_AKRJ_G0028237
 protein coding gene Chr4:57005551-57128022 (-)
BALB/cJ MGP_BALBcJ_G0028307
 protein coding gene Chr4:55621556-55739569 (-)
C3H/HeJ MGP_C3HHeJ_G0028028
 protein coding gene Chr4:57467209-57587493 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028748
 protein coding gene Chr4:59697016-59813296 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026054
 protein coding gene Chr4:52189807-52306714 (-)
CAST/EiJ MGP_CASTEiJ_G0027466
 protein coding gene Chr4:57238405-57358386 (-)
CBA/J MGP_CBAJ_G0027993
 protein coding gene Chr4:61730172-61851414 (-)
DBA/2J MGP_DBA2J_G0028143
 protein coding gene Chr4:55353564-55471287 (-)
FVB/NJ MGP_FVBNJ_G0028110
 protein coding gene Chr4:54564141-54680718 (-)
LP/J MGP_LPJ_G0028242
 protein coding gene Chr4:57752743-57874951 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028134
 protein coding gene Chr4:64844958-64977317 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028784
 protein coding gene Chr4:57193344-57309415 (-)
PWK/PhJ MGP_PWKPhJ_G0027191
 protein coding gene Chr4:55372092-55487252 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027019
 protein coding gene Chr4:56518036-56631365 (-)
WSB/EiJ MGP_WSBEiJ_G0027544
 protein coding gene Chr4:57160174-57280857 (-)



Homology
more
  • Human Ortholog
    ECPAS, Ecm29 proteasome adaptor and scaffold
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ECPAS, Ecm29 proteasome adaptor and scaffold
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ECM29, KIAA0368
  • Links
    NCBI Gene ID: 23392
    neXtProt AC: NX_Q5VYK3
    UniProt: Q5VYK3

  • Chr Location
    9q31.3; chr9:111360693-111484745 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 6056
    1 human;1 mouse;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ECPAS
  • Gene Tree
    Ecpas
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    14
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050812 Ensembl Gene Model | MGI Sequence Detail 113839 C57BL/6J ±  kb
transcript ENSMUST00000102889 Ensembl | MGI Sequence Detail 7045 Not Applicable  
polypeptide ENSMUSP00000099953 Ensembl | MGI Sequence Detail 1840 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 8
Other
Accession IDs
less
MGI:2140605, MGI:2140642
References
more
  • Summaries
    All 24
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/01/2019
MGI 6.14 		The Jackson Laboratory