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Ecpas Gene Detail
Summary
  • Symbol
    Ecpas
  • Name
    Ecm29 proteasome adaptor and scaffold
  • Synonyms
    AI314180, mKIAA0368
  • Feature Type
    protein coding gene
  • IDs
    MGI:2140220
    NCBI Gene: 230249
  • Gene Overview
    MyGene.info: ECPAS
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr4:58798911-58912749 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      113839 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 32.35 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ECPAS, Ecm29 proteasome adaptor and scaffold
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ECPAS, Ecm29 proteasome adaptor and scaffold
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ECM29, KIAA0368
  • Links
    NCBI Gene ID: 23392
    neXtProt AC: NX_Q5VYK3
    UniProt: Q5VYK3

  • Chr Location
    9q31.3; chr9:111360693-111484745 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 6056
    1 human;1 mouse;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ECPAS
  • Gene Tree
    Ecpas
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    14
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000007619 VEGA Gene Model | MGI Sequence Detail 113839 C57BL/6J ±  kb
transcript OTTMUST00000017483 VEGA | MGI Sequence Detail 7045 Not Applicable  
polypeptide OTTMUSP00000008066 VEGA | MGI Sequence Detail 1840 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    765 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 8
Other
Accession IDs
less
MGI:2140605, MGI:2140642
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/10/2018
MGI 6.12 		The Jackson Laboratory