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Mindy4b-ps Pseudogene Detail
Summary
  • Symbol
    Mindy4b-ps
  • Name
    MINDY lysine 48 deubiquitinase 4B, pseudogene
  • Synonyms
    5330432B20Rik, Fam188b2, Fam188b2-ps
Location &
Maps
more
  • Sequence Map
    Chr3:58790117-58811938 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 28.75 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    318 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2140018
pseudogene Chr3:58788407-58822311 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039817
pseudogene Chr3:57648469-57673175 (-)
A/J MGP_AJ_G0039817
pseudogene Chr3:55853546-55878389 (-)
AKR/J MGP_AKRJ_G0039744
pseudogene Chr3:57000407-57026007 (-)
BALB/cJ MGP_BALBcJ_G0039789
pseudogene Chr3:55655339-55679711 (-)
C3H/HeJ MGP_C3HHeJ_G0039445
pseudogene Chr3:57222206-57247549 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040358
pseudogene Chr3:59779909-59804147 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036965
pseudogene Chr3:52196246-52221873 (-)
CAST/EiJ MGP_CASTEiJ_G0038556
pseudogene Chr3:57394508-57421085 (-)
CBA/J MGP_CBAJ_G0039415
pseudogene Chr3:61752296-61776668 (-)
DBA/2J MGP_DBA2J_G0039615
pseudogene Chr3:55354463-55378719 (-)
FVB/NJ MGP_FVBNJ_G0039573
pseudogene Chr3:54312655-54337057 (-)
LP/J MGP_LPJ_G0039651
pseudogene Chr3:58410237-58436539 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039574
pseudogene Chr3:65908895-65934537 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040460
pseudogene Chr3:56976267-57000871 (-)
PWK/PhJ MGP_PWKPhJ_G0038237
pseudogene Chr3:54988877-55016674 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037980
pseudogene Chr3:56659088-56686520 (-)
WSB/EiJ MGP_WSBEiJ_G0038791
pseudogene Chr3:57051377-57076524 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 100040293 NCBI Gene Model | MGI Sequence Detail 21822 C57BL/6J ±  kb
transcript AK030561 GenBank | EMBL | DDBJ | MGI Sequence Detail 2173 C57BL/6J  
polypeptide A0A1W2P7H6 UniProt | EBI | MGI Sequence Detail 457 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR025257 Domain of unknown function DUF4205
    IPR039785 Ubiquitin carboxyl-terminal hydrolase MINDY-3/4
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
Other
Accession IDs
less
MGI:3780863
References
more
  • Summaries
    All 13
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/04/2019
MGI 6.14
The Jackson Laboratory