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AW047730 Gene Detail
Summary
  • Symbol
    AW047730
  • Name
    expressed sequence AW047730
  • Feature Type
    unclassified non-coding RNA gene
  • IDs
    MGI:2139951
    NCBI Gene: 99870
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:88200623-88203481 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 38.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139951
unclassified non-coding RNA gene Chr3:88200205-88203484 (+)
129S1/SvImJ MGP_129S1SvImJ_G0015508
unclassified non-coding RNA gene Chr3:88348936-88351794 (+)
A/J MGP_AJ_G0015485
unclassified non-coding RNA gene Chr3:85350407-85353265 (+)
AKR/J MGP_AKRJ_G0015448
unclassified non-coding RNA gene Chr3:87442218-87445076 (+)
BALB/cJ MGP_BALBcJ_G0015447
unclassified non-coding RNA gene Chr3:85441497-85444355 (+)
C3H/HeJ MGP_C3HHeJ_G0015270
unclassified non-coding RNA gene Chr3:87731937-87734795 (+)
C57BL/6NJ MGP_C57BL6NJ_G0015901
unclassified non-coding RNA gene Chr3:91598313-91601171 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013638
unclassified non-coding RNA gene Chr3:80974746-80977635 (+)
CAST/EiJ MGP_CASTEiJ_G0014823
unclassified non-coding RNA gene Chr3:87939720-87942590 (+)
CBA/J MGP_CBAJ_G0015251
unclassified non-coding RNA gene Chr3:94720133-94722991 (+)
DBA/2J MGP_DBA2J_G0015345
unclassified non-coding RNA gene Chr3:84837082-84839940 (+)
FVB/NJ MGP_FVBNJ_G0015352
unclassified non-coding RNA gene Chr3:83111251-83114109 (+)
LP/J MGP_LPJ_G0015423
unclassified non-coding RNA gene Chr3:89315924-89318782 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015376
unclassified non-coding RNA gene Chr3:100955313-100958171 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0015942
unclassified non-coding RNA gene Chr3:87206098-87208956 (+)
PWK/PhJ MGP_PWKPhJ_G0014611
unclassified non-coding RNA gene Chr3:84634603-84637436 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014399
unclassified non-coding RNA gene Chr3:86384961-86387852 (+)
WSB/EiJ MGP_WSBEiJ_G0014930
unclassified non-coding RNA gene Chr3:87561281-87564150 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    27
  • Chemically induced (other)
    1
  • Gene trapped
    25
  • Radiation induced
    1
  • Genomic Mutations
    2 involving AW047730
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097428 Ensembl Gene Model | MGI Sequence Detail 2859 C57BL/6J ±  kb
transcript ENSMUST00000181406 Ensembl | MGI Sequence Detail 2579 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory