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AI849053 Gene Detail
Summary
  • Symbol
    AI849053
  • Name
    expressed sequence AI849053
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2139818
    NCBI Gene: 329697
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:88106409-88111902 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139818
 lncRNA gene Chr3:88106409-88111902 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006232
 lincRNA gene Chr3:88347420-88352908 (-)
A/J MGP_AJ_G0006224
 lincRNA gene Chr3:85348884-85354378 (-)
AKR/J MGP_AKRJ_G0006200
 lincRNA gene Chr3:87440696-87446190 (-)
BALB/cJ MGP_BALBcJ_G0006200
 lincRNA gene Chr3:85439976-85445469 (-)
C3H/HeJ MGP_C3HHeJ_G0006150
 lincRNA gene Chr3:87730416-87735908 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006364
 lincRNA gene Chr3:91596794-91602285 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005669
 lincRNA gene Chr3:80973183-80978753 (-)
CAST/EiJ MGP_CASTEiJ_G0006084
 lincRNA gene Chr3:87935937-87943710 (-)
CBA/J MGP_CBAJ_G0006135
 lincRNA gene Chr3:94718614-94724104 (-)
DBA/2J MGP_DBA2J_G0006154
 lincRNA gene Chr3:84835561-84841054 (-)
FVB/NJ MGP_FVBNJ_G0006178
 lincRNA gene Chr3:83109727-83115222 (-)
LP/J MGP_LPJ_G0006237
 lincRNA gene Chr3:89314411-89319896 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006168
 lincRNA gene Chr3:100953788-100959284 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006368
 lincRNA gene Chr3:87204577-87210070 (-)
PWK/PhJ MGP_PWKPhJ_G0006029
 lincRNA gene Chr3:84632731-84638497 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005936
 lincRNA gene Chr3:86383389-86388980 (-)
WSB/EiJ MGP_WSBEiJ_G0006131
 lincRNA gene Chr3:87559712-87565264 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097280 Ensembl Gene Model | MGI Sequence Detail 5494 C57BL/6J ±  kb
transcript ENSMUST00000181021 Ensembl | MGI Sequence Detail 2658 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory