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AI504432 Gene Detail
Summary
  • Symbol
    AI504432
  • Name
    expressed sequence AI504432
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2139742
    NCBI Gene: 229694
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr3:107039504-107054322 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    78 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139742
lncRNA gene Chr3:107039504-107054347 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006271
lincRNA gene Chr3:108504777-108519620 (+)
A/J MGP_AJ_G0006264
lincRNA gene Chr3:105068385-105084113 (+)
AKR/J MGP_AKRJ_G0006240
lincRNA gene Chr3:107640414-107655383 (+)
BALB/cJ MGP_BALBcJ_G0006238
lincRNA gene Chr3:104766316-104781159 (+)
C3H/HeJ MGP_C3HHeJ_G0006190
lincRNA gene Chr3:107975747-107992593 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006403
lincRNA gene Chr3:112580529-112595372 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005702
lincRNA gene Chr3:101225761-101240645 (+)
CAST/EiJ MGP_CASTEiJ_G0006124
lincRNA gene Chr3:107338699-107354210 (+)
CBA/J MGP_CBAJ_G0006174
lincRNA gene Chr3:116362118-116379533 (+)
DBA/2J MGP_DBA2J_G0006195
lincRNA gene Chr3:104272421-104287383 (+)
FVB/NJ MGP_FVBNJ_G0006216
lincRNA gene Chr3:102150302-102166690 (+)
LP/J MGP_LPJ_G0006276
lincRNA gene Chr3:109925398-109940241 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006207
lincRNA gene Chr3:122491731-122520767 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006409
lincRNA gene Chr3:107221127-107236043 (+)
PWK/PhJ MGP_PWKPhJ_G0006064
lincRNA gene Chr3:103991839-104006978 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005975
lincRNA gene Chr3:105363499-105379622 (+)
WSB/EiJ MGP_WSBEiJ_G0006171
lincRNA gene Chr3:107751512-107766357 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving AI504432
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 229694 NCBI Gene Model | MGI Sequence Detail 14819 C57BL/6J ±  kb
transcript NR_033498 RefSeq | MGI Sequence Detail 5547 C57BL/6  
polypeptide Q8CAB2 UniProt | EBI | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 24
    cDNA 24

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 3
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory